RNA–Protein interactions for RNA: ENST00000546455.5

PCED1B-202, Transcript of PC-esterase domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCED1B, Length 2,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-202ENST00000546455 NISCHQ9Y2I1 1504 aa32.38■■■□□ 2.77
PCED1B-202ENST00000546455 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.04
PCED1B-202ENST00000546455 CCDC180Q9P1Z9 1646 aa27.45■■□□□ 1.98
PCED1B-202ENST00000546455 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
PCED1B-202ENST00000546455 SUPT5HO00267 1087 aaKnown RBP27.18■■□□□ 1.94
PCED1B-202ENST00000546455 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
PCED1B-202ENST00000546455 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
PCED1B-202ENST00000546455 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
PCED1B-202ENST00000546455 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
PCED1B-202ENST00000546455 SCRIBQ14160 1630 aa25.89■■□□□ 1.73
PCED1B-202ENST00000546455 ABCC9O60706 1549 aa25.82■■□□□ 1.72
PCED1B-202ENST00000546455 RSF1Q96T23 1441 aaPredicted RBP25.65■■□□□ 1.7
PCED1B-202ENST00000546455 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.7
PCED1B-202ENST00000546455 PCGF6Q9BYE7 350 aa25.54■■□□□ 1.68
PCED1B-202ENST00000546455 HRCP23327 699 aa25.45■■□□□ 1.66
PCED1B-202ENST00000546455 NACADO15069 1562 aa25.42■■□□□ 1.66
PCED1B-202ENST00000546455 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.66
PCED1B-202ENST00000546455 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
PCED1B-202ENST00000546455 TRIM41Q8WV44 630 aa25.26■■□□□ 1.63
PCED1B-202ENST00000546455 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
PCED1B-202ENST00000546455 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
PCED1B-202ENST00000546455 WIZO95785 1651 aa25.08■■□□□ 1.61
PCED1B-202ENST00000546455 PPARGC1BQ86YN6 1023 aaKnown RBP25.06■■□□□ 1.6
PCED1B-202ENST00000546455 EHMT2Q96KQ7 1210 aa25.02■■□□□ 1.6
PCED1B-202ENST00000546455 TRIM26Q12899 539 aaPredicted RBP24.98■■□□□ 1.59
PCED1B-202ENST00000546455 BAZ1AQ9NRL2 1556 aaPredicted RBP24.86■■□□□ 1.57
PCED1B-202ENST00000546455 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
PCED1B-202ENST00000546455 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
PCED1B-202ENST00000546455 SMARCA4P51532 1647 aa24.66■■□□□ 1.54
PCED1B-202ENST00000546455 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
PCED1B-202ENST00000546455 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
PCED1B-202ENST00000546455 PABPN1Q86U42 306 aaKnown RBP eCLIP24.58■■□□□ 1.53
PCED1B-202ENST00000546455 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
PCED1B-202ENST00000546455 SMARCA2P51531 1590 aa24.52■■□□□ 1.52
PCED1B-202ENST00000546455 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
PCED1B-202ENST00000546455 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
PCED1B-202ENST00000546455 SOGA1O94964 1423 aa24.32■■□□□ 1.48
PCED1B-202ENST00000546455 RUSC2Q8N2Y8 1516 aa24.22■■□□□ 1.47
PCED1B-202ENST00000546455 TTBK1Q5TCY1 1321 aaPredicted RBP24.19■■□□□ 1.46
PCED1B-202ENST00000546455 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
PCED1B-202ENST00000546455 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.45
PCED1B-202ENST00000546455 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
PCED1B-202ENST00000546455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.1■■□□□ 1.45
PCED1B-202ENST00000546455 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.45
PCED1B-202ENST00000546455 UBTFP17480 764 aaKnown RBP24.09■■□□□ 1.45
PCED1B-202ENST00000546455 TNIKQ9UKE5 1360 aa24.07■■□□□ 1.44
PCED1B-202ENST00000546455 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
PCED1B-202ENST00000546455 EEA1Q15075 1411 aa24.05■■□□□ 1.44
PCED1B-202ENST00000546455 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
PCED1B-202ENST00000546455 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
PCED1B-202ENST00000546455 CCER1Q8TC90 406 aaPredicted RBP23.98■■□□□ 1.43
PCED1B-202ENST00000546455 GOLGA3Q08378 1498 aa23.95■■□□□ 1.42
PCED1B-202ENST00000546455 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
PCED1B-202ENST00000546455 KIF21BO75037 1637 aa23.74■■□□□ 1.39
PCED1B-202ENST00000546455 RANGAP1P46060 587 aaPredicted RBP23.74■■□□□ 1.39
PCED1B-202ENST00000546455 CLIP1P30622 1438 aa23.71■■□□□ 1.39
PCED1B-202ENST00000546455 RAPGEF2Q9Y4G8 1499 aa23.71■■□□□ 1.39
PCED1B-202ENST00000546455 TOP2BQ02880 1626 aa23.63■■□□□ 1.37
PCED1B-202ENST00000546455 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.36
PCED1B-202ENST00000546455 HNRNPUL2Q1KMD3 747 aaKnown RBP23.57■■□□□ 1.36
PCED1B-202ENST00000546455 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
PCED1B-202ENST00000546455 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
PCED1B-202ENST00000546455 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
PCED1B-202ENST00000546455 APLP2Q06481 763 aa23.5■■□□□ 1.35
PCED1B-202ENST00000546455 CUX1P39880 1505 aa23.47■■□□□ 1.35
PCED1B-202ENST00000546455 SCAF1Q9H7N4 1312 aaKnown RBP23.46■■□□□ 1.35
PCED1B-202ENST00000546455 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
PCED1B-202ENST00000546455 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
PCED1B-202ENST00000546455 CFTRP13569 1480 aa23.38■■□□□ 1.33
PCED1B-202ENST00000546455 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
PCED1B-202ENST00000546455 ARAP1Q96P48 1450 aa23.33■■□□□ 1.33
PCED1B-202ENST00000546455 KIF27Q86VH2 1401 aa23.33■■□□□ 1.33
PCED1B-202ENST00000546455 ZNF316A6NFI3 1004 aaPredicted RBP23.28■■□□□ 1.32
PCED1B-202ENST00000546455 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.32
PCED1B-202ENST00000546455 NEUROD1Q13562 356 aa23.25■■□□□ 1.31
PCED1B-202ENST00000546455 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
PCED1B-202ENST00000546455 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
PCED1B-202ENST00000546455 CUX2O14529 1486 aa23.16■■□□□ 1.3
PCED1B-202ENST00000546455 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
PCED1B-202ENST00000546455 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
PCED1B-202ENST00000546455 ARHGAP35Q9NRY4 1499 aa23.14■■□□□ 1.29
PCED1B-202ENST00000546455 IGF1RP08069 1367 aa23.11■■□□□ 1.29
PCED1B-202ENST00000546455 PRDM2Q13029 1718 aa23.08■■□□□ 1.29
PCED1B-202ENST00000546455 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
PCED1B-202ENST00000546455 CENPBP07199 599 aaPredicted RBP23.05■■□□□ 1.28
PCED1B-202ENST00000546455 DHX57Q6P158 1386 aaKnown RBP23.03■■□□□ 1.28
PCED1B-202ENST00000546455 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
PCED1B-202ENST00000546455 MIER1Q8N108 512 aa23■■□□□ 1.27
PCED1B-202ENST00000546455 ITGAEP38570 1179 aa23■■□□□ 1.27
PCED1B-202ENST00000546455 YTHDC1Q96MU7 727 aaKnown RBP23■■□□□ 1.27
PCED1B-202ENST00000546455 RRBP1Q9P2E9 1410 aaKnown RBP23■■□□□ 1.27
PCED1B-202ENST00000546455 GTF3C3Q9Y5Q9 886 aa22.99■■□□□ 1.27
PCED1B-202ENST00000546455 CCNB3Q8WWL7 1395 aa22.94■■□□□ 1.26
PCED1B-202ENST00000546455 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
PCED1B-202ENST00000546455 P3H3Q8IVL6 736 aa22.91■■□□□ 1.26
PCED1B-202ENST00000546455 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.25
PCED1B-202ENST00000546455 CLSPNQ9HAW4 1339 aa22.88■■□□□ 1.25
PCED1B-202ENST00000546455 NESP48681 1621 aa22.86■■□□□ 1.25
PCED1B-202ENST00000546455 TIAM1Q13009 1591 aa22.84■■□□□ 1.25
PCED1B-202ENST00000546455 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms