Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCA10Q71F78 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LCA10Q71F78 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LCA10Q71F78 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCA10Q71F78 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCA10Q71F78 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCA10Q71F78 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LCA10Q71F78 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC17.44■□□□□ 0.38
LCA10Q71F78 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCA10Q71F78 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LCA10Q71F78 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCA10Q71F78 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LCA10Q71F78 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LCA10Q71F78 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCA10Q71F78 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LCA10Q71F78 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCA10Q71F78 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCA10Q71F78 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC16.73■□□□□ 0.27
LCA10Q71F78 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LCA10Q71F78 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LCA10Q71F78 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCA10Q71F78 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCA10Q71F78 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCA10Q71F78 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LCA10Q71F78 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCA10Q71F78 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCA10Q71F78 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCA10Q71F78 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LCA10Q71F78 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LCA10Q71F78 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LCA10Q71F78 AL161658.1-201ENST00000623641 1967 ntBASIC16.32■□□□□ 0.2
LCA10Q71F78 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCA10Q71F78 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LCA10Q71F78 HES6-203ENST00000409160 1600 ntTSL 2 BASIC16.23■□□□□ 0.19
LCA10Q71F78 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCA10Q71F78 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC16.2■□□□□ 0.18
LCA10Q71F78 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA10Q71F78 AL356512.1-201ENST00000607453 1739 ntBASIC16.2■□□□□ 0.18
LCA10Q71F78 ST7-205ENST00000393446 2114 ntTSL 5 BASIC16.2■□□□□ 0.18
LCA10Q71F78 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCA10Q71F78 ST7-202ENST00000323984 2142 ntTSL 5 BASIC16.18■□□□□ 0.18
LCA10Q71F78 ST7-207ENST00000393449 2127 ntTSL 5 BASIC16.18■□□□□ 0.18
LCA10Q71F78 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCA10Q71F78 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC16.17■□□□□ 0.18
LCA10Q71F78 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCA10Q71F78 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LCA10Q71F78 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCA10Q71F78 AC139426.1-201ENST00000568218 2529 ntBASIC16.13■□□□□ 0.17
LCA10Q71F78 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC16.09■□□□□ 0.17
LCA10Q71F78 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCA10Q71F78 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
LCA10Q71F78 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LCA10Q71F78 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC16.07■□□□□ 0.16
LCA10Q71F78 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCA10Q71F78 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCA10Q71F78 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCA10Q71F78 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA10Q71F78 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA10Q71F78 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA10Q71F78 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCA10Q71F78 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
LCA10Q71F78 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LCA10Q71F78 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC15.9■□□□□ 0.14
LCA10Q71F78 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LCA10Q71F78 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCA10Q71F78 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCA10Q71F78 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
LCA10Q71F78 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCA10Q71F78 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LCA10Q71F78 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LCA10Q71F78 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCA10Q71F78 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCA10Q71F78 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCA10Q71F78 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCA10Q71F78 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCA10Q71F78 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCA10Q71F78 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCA10Q71F78 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCA10Q71F78 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCA10Q71F78 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
LCA10Q71F78 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LCA10Q71F78 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LCA10Q71F78 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCA10Q71F78 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCA10Q71F78 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC15.62■□□□□ 0.09
LCA10Q71F78 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LCA10Q71F78 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCA10Q71F78 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCA10Q71F78 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LCA10Q71F78 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCA10Q71F78 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCA10Q71F78 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC15.54■□□□□ 0.08
LCA10Q71F78 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LCA10Q71F78 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCA10Q71F78 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCA10Q71F78 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCA10Q71F78 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LCA10Q71F78 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCA10Q71F78 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LCA10Q71F78 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms