Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.69■□□□□ 0.26
ATXN3P54252 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.69■□□□□ 0.26
ATXN3P54252 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.69■□□□□ 0.26
ATXN3P54252 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.69■□□□□ 0.26
ATXN3P54252 AC078925.2-201ENST00000624013 1973 ntBASIC16.69■□□□□ 0.26
ATXN3P54252 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.69■□□□□ 0.26
ATXN3P54252 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.69■□□□□ 0.26
ATXN3P54252 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.69■□□□□ 0.26
ATXN3P54252 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.69■□□□□ 0.26
ATXN3P54252 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ATXN3P54252 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.68■□□□□ 0.26
ATXN3P54252 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ATXN3P54252 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
ATXN3P54252 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.68■□□□□ 0.26
ATXN3P54252 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ATXN3P54252 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.68■□□□□ 0.26
ATXN3P54252 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.68■□□□□ 0.26
ATXN3P54252 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.68■□□□□ 0.26
ATXN3P54252 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.68■□□□□ 0.26
ATXN3P54252 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 AC005412.3-201ENST00000580309 715 ntBASIC16.68■□□□□ 0.26
ATXN3P54252 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 AL008721.1-201ENST00000609964 604 ntBASIC16.68■□□□□ 0.26
ATXN3P54252 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.68■□□□□ 0.26
ATXN3P54252 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.68■□□□□ 0.26
ATXN3P54252 AC012569.1-201ENST00000591191 1524 ntBASIC16.68■□□□□ 0.26
ATXN3P54252 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 AC026691.1-201ENST00000602502 2017 ntBASIC16.68■□□□□ 0.26
ATXN3P54252 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 AC092364.2-201ENST00000596710 2692 ntBASIC16.68■□□□□ 0.26
ATXN3P54252 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
ATXN3P54252 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATXN3P54252 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ATXN3P54252 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.68■□□□□ 0.26
ATXN3P54252 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.67■□□□□ 0.26
ATXN3P54252 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.67■□□□□ 0.26
ATXN3P54252 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
ATXN3P54252 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.67■□□□□ 0.26
ATXN3P54252 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
ATXN3P54252 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.67■□□□□ 0.26
ATXN3P54252 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 MIR661-201ENST00000384842 89 ntBASIC16.67■□□□□ 0.26
ATXN3P54252 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.67■□□□□ 0.26
ATXN3P54252 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.67■□□□□ 0.26
ATXN3P54252 AC107918.2-201ENST00000530817 355 ntBASIC16.67■□□□□ 0.26
ATXN3P54252 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.67■□□□□ 0.26
ATXN3P54252 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.67■□□□□ 0.26
ATXN3P54252 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.67■□□□□ 0.26
ATXN3P54252 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATXN3P54252 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ATXN3P54252 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.67■□□□□ 0.26
ATXN3P54252 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 AC016396.2-201ENST00000562575 1417 ntBASIC16.67■□□□□ 0.26
ATXN3P54252 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.67■□□□□ 0.26
ATXN3P54252 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATXN3P54252 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms