Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.26■□□□□ 0.03
HCN1O60741 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.26■□□□□ 0.03
HCN1O60741 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.26■□□□□ 0.03
HCN1O60741 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.26■□□□□ 0.03
HCN1O60741 AC004835.2-201ENST00000603762 682 ntBASIC15.26■□□□□ 0.03
HCN1O60741 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 AL513210.1-201ENST00000629608 234 ntBASIC15.26■□□□□ 0.03
HCN1O60741 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.26■□□□□ 0.03
HCN1O60741 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.26■□□□□ 0.03
HCN1O60741 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HCN1O60741 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 AC012569.1-201ENST00000591191 1524 ntBASIC15.26■□□□□ 0.03
HCN1O60741 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.26■□□□□ 0.03
HCN1O60741 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
HCN1O60741 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.26■□□□□ 0.03
HCN1O60741 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCN1O60741 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 AC126755.1-201ENST00000525846 6405 ntBASIC15.25■□□□□ 0.03
HCN1O60741 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
HCN1O60741 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.25■□□□□ 0.03
HCN1O60741 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 AC105339.1-204ENST00000636249 355 ntBASIC15.25■□□□□ 0.03
HCN1O60741 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.25■□□□□ 0.03
HCN1O60741 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HCN1O60741 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCN1O60741 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HCN1O60741 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.24■□□□□ 0.03
HCN1O60741 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.24■□□□□ 0.03
HCN1O60741 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 MTHFR-217ENST00000641820 1569 ntBASIC15.24■□□□□ 0.03
HCN1O60741 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.24■□□□□ 0.03
HCN1O60741 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms