Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLCC1Q96S66 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 AC138035.3-201ENST00000622706 2791 ntBASIC13.8□□□□□ -0.2
CLCC1Q96S66 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 SPDYE21P-201ENST00000413323 827 ntBASIC13.8□□□□□ -0.2
CLCC1Q96S66 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 MTDHP3-201ENST00000594186 672 ntBASIC13.8□□□□□ -0.2
CLCC1Q96S66 CLEC4GP1-201ENST00000596555 870 ntBASIC13.8□□□□□ -0.2
CLCC1Q96S66 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 AP005117.1-201ENST00000584346 1413 ntBASIC13.8□□□□□ -0.2
CLCC1Q96S66 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCC1Q96S66 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCC1Q96S66 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCC1Q96S66 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLCC1Q96S66 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms