RNA–Protein interactions for RNA: ENST00000335514.9

ATPIF1-201, Transcript of ATPase inhibitor, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPIF1, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPIF1-201ENST00000335514 NISCHQ9Y2I1 1504 aa41.88■■■■■ 4.29
ATPIF1-201ENST00000335514 CCDC180Q9P1Z9 1646 aa37.2■■■■□ 3.55
ATPIF1-201ENST00000335514 ABCC9O60706 1549 aa36.14■■■■□ 3.38
ATPIF1-201ENST00000335514 DCAF8L2P0C7V8 631 aa35.01■■■■□ 3.2
ATPIF1-201ENST00000335514 NACADO15069 1562 aa34.99■■■■□ 3.19
ATPIF1-201ENST00000335514 RB1CC1Q8TDY2 1594 aa34.97■■■■□ 3.19
ATPIF1-201ENST00000335514 ZCCHC6Q5VYS8 1495 aaKnown RBP34.89■■■■□ 3.18
ATPIF1-201ENST00000335514 MYO15BQ96JP2 1530 aa34.86■■■■□ 3.17
ATPIF1-201ENST00000335514 DCAF1Q9Y4B6 1507 aa34.74■■■■□ 3.15
ATPIF1-201ENST00000335514 UNC13AQ9UPW8 1703 aa33.99■■■■□ 3.03
ATPIF1-201ENST00000335514 SCRIBQ14160 1630 aa33.83■■■■□ 3.01
ATPIF1-201ENST00000335514 PABPN1Q86U42 306 aaKnown RBP eCLIP33.81■■■■□ 3
ATPIF1-201ENST00000335514 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
ATPIF1-201ENST00000335514 SHROOM4Q9ULL8 1493 aa33.64■■■□□ 2.98
ATPIF1-201ENST00000335514 DNAJC5BQ9UF47 199 aa32.94■■■□□ 2.86
ATPIF1-201ENST00000335514 EIF4G1Q04637 1599 aaKnown RBP32.91■■■□□ 2.86
ATPIF1-201ENST00000335514 CC2D2AQ9P2K1 1620 aa32.72■■■□□ 2.83
ATPIF1-201ENST00000335514 CECR2Q9BXF3 1484 aa32.52■■■□□ 2.8
ATPIF1-201ENST00000335514 BAZ1AQ9NRL2 1556 aaPredicted RBP32.51■■■□□ 2.79
ATPIF1-201ENST00000335514 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
ATPIF1-201ENST00000335514 SMARCA2P51531 1590 aa32.29■■■□□ 2.76
ATPIF1-201ENST00000335514 NCAPD3P42695 1498 aa32.25■■■□□ 2.75
ATPIF1-201ENST00000335514 ATAD2BQ9ULI0 1458 aa32.24■■■□□ 2.75
ATPIF1-201ENST00000335514 MROH2BQ7Z745 1585 aa32.19■■■□□ 2.74
ATPIF1-201ENST00000335514 PEG3Q9GZU2 1588 aa32.15■■■□□ 2.74
ATPIF1-201ENST00000335514 HMGXB3Q12766 1538 aa32.09■■■□□ 2.73
ATPIF1-201ENST00000335514 BAZ1BQ9UIG0 1483 aaKnown RBP32.03■■■□□ 2.72
ATPIF1-201ENST00000335514 RSF1Q96T23 1441 aaPredicted RBP31.95■■■□□ 2.71
ATPIF1-201ENST00000335514 WIZO95785 1651 aa31.85■■■□□ 2.69
ATPIF1-201ENST00000335514 TOP2AP11388 1531 aaKnown RBP31.6■■■□□ 2.65
ATPIF1-201ENST00000335514 LAMC3Q9Y6N6 1575 aa31.39■■■□□ 2.61
ATPIF1-201ENST00000335514 CADPSQ9ULU8 1353 aa31.34■■■□□ 2.61
ATPIF1-201ENST00000335514 SUPT5HO00267 1087 aaKnown RBP31.31■■■□□ 2.6
ATPIF1-201ENST00000335514 NESP48681 1621 aa31.26■■■□□ 2.59
ATPIF1-201ENST00000335514 ERCC6Q03468 1493 aa31.26■■■□□ 2.59
ATPIF1-201ENST00000335514 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
ATPIF1-201ENST00000335514 CCDC88BA6NC98 1476 aa31.21■■■□□ 2.59
ATPIF1-201ENST00000335514 CFTRP13569 1480 aa31.15■■■□□ 2.58
ATPIF1-201ENST00000335514 FANCD2Q9BXW9 1451 aa30.93■■■□□ 2.54
ATPIF1-201ENST00000335514 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
ATPIF1-201ENST00000335514 PRDM2Q13029 1718 aa30.9■■■□□ 2.54
ATPIF1-201ENST00000335514 CEP164Q9UPV0 1460 aa30.9■■■□□ 2.54
ATPIF1-201ENST00000335514 CUX2O14529 1486 aa30.89■■■□□ 2.53
ATPIF1-201ENST00000335514 MRC2Q9UBG0 1479 aa30.81■■■□□ 2.52
ATPIF1-201ENST00000335514 THOC2Q8NI27 1593 aaKnown RBP30.79■■■□□ 2.52
ATPIF1-201ENST00000335514 WDR62O43379 1518 aa30.67■■■□□ 2.5
ATPIF1-201ENST00000335514 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
ATPIF1-201ENST00000335514 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
ATPIF1-201ENST00000335514 DNMBPQ6XZF7 1577 aa30.43■■■□□ 2.46
ATPIF1-201ENST00000335514 TOPBP1Q92547 1522 aa30.42■■■□□ 2.46
ATPIF1-201ENST00000335514 IFT140Q96RY7 1462 aa30.27■■■□□ 2.44
ATPIF1-201ENST00000335514 CUX1P39880 1505 aa30.21■■■□□ 2.43
ATPIF1-201ENST00000335514 WRNQ14191 1432 aaPredicted RBP eCLIP30.18■■■□□ 2.42
ATPIF1-201ENST00000335514 POLA1P09884 1462 aaPredicted RBP30.17■■■□□ 2.42
ATPIF1-201ENST00000335514 SOGA1O94964 1423 aa30.13■■■□□ 2.41
ATPIF1-201ENST00000335514 FGD5Q6ZNL6 1462 aa30.12■■■□□ 2.41
ATPIF1-201ENST00000335514 TOP2BQ02880 1626 aa30.06■■■□□ 2.4
ATPIF1-201ENST00000335514 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
ATPIF1-201ENST00000335514 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
ATPIF1-201ENST00000335514 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
ATPIF1-201ENST00000335514 WDR97A6NE52 1622 aa29.99■■■□□ 2.39
ATPIF1-201ENST00000335514 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
ATPIF1-201ENST00000335514 SYNJ1O43426 1573 aa29.96■■■□□ 2.39
ATPIF1-201ENST00000335514 EIF4G3O43432 1585 aaKnown RBP29.89■■■□□ 2.38
ATPIF1-201ENST00000335514 AQRO60306 1485 aaKnown RBP eCLIP29.88■■■□□ 2.37
ATPIF1-201ENST00000335514 ABCA10Q8WWZ4 1543 aa29.88■■■□□ 2.37
ATPIF1-201ENST00000335514 TDRD9Q8NDG6 1382 aaKnown RBP29.87■■■□□ 2.37
ATPIF1-201ENST00000335514 GAPVD1Q14C86 1478 aa29.78■■■□□ 2.36
ATPIF1-201ENST00000335514 GRIN2BQ13224 1484 aa29.76■■■□□ 2.35
ATPIF1-201ENST00000335514 DNAJC5Q9H3Z4 198 aa29.72■■■□□ 2.35
ATPIF1-201ENST00000335514 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
ATPIF1-201ENST00000335514 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
ATPIF1-201ENST00000335514 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
ATPIF1-201ENST00000335514 MAGI1Q96QZ7 1491 aaPredicted RBP29.68■■■□□ 2.34
ATPIF1-201ENST00000335514 SNAPC4Q5SXM2 1469 aa29.61■■■□□ 2.33
ATPIF1-201ENST00000335514 PBRM1Q86U86 1689 aa29.61■■■□□ 2.33
ATPIF1-201ENST00000335514 FBLN2P98095 1184 aa29.6■■■□□ 2.33
ATPIF1-201ENST00000335514 CHMP7Q8WUX9 453 aaPredicted RBP29.6■■■□□ 2.33
ATPIF1-201ENST00000335514 KIF27Q86VH2 1401 aa29.6■■■□□ 2.33
ATPIF1-201ENST00000335514 ERICH3Q5RHP9 1530 aa29.57■■■□□ 2.32
ATPIF1-201ENST00000335514 SYNJ2O15056 1496 aa29.54■■■□□ 2.32
ATPIF1-201ENST00000335514 CHD1O14646 1710 aa29.46■■■□□ 2.31
ATPIF1-201ENST00000335514 FHAD1B1AJZ9 1412 aa29.45■■■□□ 2.31
ATPIF1-201ENST00000335514 ADAMTS12P58397 1594 aa29.39■■■□□ 2.29
ATPIF1-201ENST00000335514 IGF1RP08069 1367 aa29.39■■■□□ 2.29
ATPIF1-201ENST00000335514 GRIN2AQ12879 1464 aa29.33■■■□□ 2.29
ATPIF1-201ENST00000335514 CUL7Q14999 1698 aa29.33■■■□□ 2.29
ATPIF1-201ENST00000335514 CHIC1Q5VXU3 224 aa29.31■■■□□ 2.28
ATPIF1-201ENST00000335514 CARMIL1Q5VZK9 1371 aa29.26■■■□□ 2.28
ATPIF1-201ENST00000335514 EEA1Q15075 1411 aa29.2■■■□□ 2.27
ATPIF1-201ENST00000335514 NUP160Q12769 1436 aa29.2■■■□□ 2.26
ATPIF1-201ENST00000335514 CLASP1Q7Z460 1538 aa29.17■■■□□ 2.26
ATPIF1-201ENST00000335514 RUSC2Q8N2Y8 1516 aa29.15■■■□□ 2.26
ATPIF1-201ENST00000335514 RAPGEF2Q9Y4G8 1499 aa29.1■■■□□ 2.25
ATPIF1-201ENST00000335514 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
ATPIF1-201ENST00000335514 CSRNP3Q8WYN3 585 aa29.09■■■□□ 2.25
ATPIF1-201ENST00000335514 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
ATPIF1-201ENST00000335514 KIAA0586Q9BVV6 1533 aa29.01■■■□□ 2.23
ATPIF1-201ENST00000335514 RIMBP3CA6NJZ7 1639 aa29.01■■■□□ 2.23
ATPIF1-201ENST00000335514 RIMBP3BA6NNM3 1639 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms