RNA–Protein interactions for RNA: ENST00000591265.1

ZNF554-204, Transcript of zinc finger protein 554, humanhuman

TSL 5 BASIC

Gene ZNF554, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-204ENST00000591265 NISCHQ9Y2I1 1504 aa44.54■■■■■ 4.72
ZNF554-204ENST00000591265 ABCC9O60706 1549 aa40.26■■■■■ 4.03
ZNF554-204ENST00000591265 CCDC180Q9P1Z9 1646 aa40.05■■■■■ 4
ZNF554-204ENST00000591265 RB1CC1Q8TDY2 1594 aa38.27■■■■□ 3.72
ZNF554-204ENST00000591265 DNAJC5BQ9UF47 199 aa38.02■■■■□ 3.68
ZNF554-204ENST00000591265 NACADO15069 1562 aa37.98■■■■□ 3.67
ZNF554-204ENST00000591265 DCAF8L2P0C7V8 631 aa37.66■■■■□ 3.62
ZNF554-204ENST00000591265 PABPN1Q86U42 306 aaKnown RBP eCLIP37.46■■■■□ 3.59
ZNF554-204ENST00000591265 MYO15BQ96JP2 1530 aa37.43■■■■□ 3.58
ZNF554-204ENST00000591265 UNC13AQ9UPW8 1703 aa37.26■■■■□ 3.56
ZNF554-204ENST00000591265 BICRAQ9NZM4 1560 aa37.12■■■■□ 3.53
ZNF554-204ENST00000591265 ZCCHC6Q5VYS8 1495 aaKnown RBP36.84■■■■□ 3.49
ZNF554-204ENST00000591265 DCAF1Q9Y4B6 1507 aa36.84■■■■□ 3.49
ZNF554-204ENST00000591265 SHROOM4Q9ULL8 1493 aa36.73■■■■□ 3.47
ZNF554-204ENST00000591265 SCRIBQ14160 1630 aa36.39■■■■□ 3.42
ZNF554-204ENST00000591265 CC2D2AQ9P2K1 1620 aa36.36■■■■□ 3.41
ZNF554-204ENST00000591265 CECR2Q9BXF3 1484 aa36.34■■■■□ 3.41
ZNF554-204ENST00000591265 EIF4G1Q04637 1599 aaKnown RBP36.24■■■■□ 3.39
ZNF554-204ENST00000591265 DNAJC5Q9H3Z4 198 aa35.18■■■■□ 3.22
ZNF554-204ENST00000591265 NCAPD3P42695 1498 aa35.09■■■■□ 3.21
ZNF554-204ENST00000591265 ATAD2BQ9ULI0 1458 aa34.9■■■■□ 3.18
ZNF554-204ENST00000591265 CUX2O14529 1486 aa34.9■■■■□ 3.18
ZNF554-204ENST00000591265 ERCC6Q03468 1493 aa34.81■■■■□ 3.16
ZNF554-204ENST00000591265 SMARCA2P51531 1590 aa34.8■■■■□ 3.16
ZNF554-204ENST00000591265 HMGXB3Q12766 1538 aa34.76■■■■□ 3.16
ZNF554-204ENST00000591265 SMARCA4P51532 1647 aa34.74■■■■□ 3.15
ZNF554-204ENST00000591265 BAZ1AQ9NRL2 1556 aaPredicted RBP34.59■■■■□ 3.13
ZNF554-204ENST00000591265 BAZ1BQ9UIG0 1483 aaKnown RBP34.53■■■■□ 3.12
ZNF554-204ENST00000591265 NESP48681 1621 aa34.49■■■■□ 3.11
ZNF554-204ENST00000591265 PEG3Q9GZU2 1588 aa34.48■■■■□ 3.11
ZNF554-204ENST00000591265 LAMC3Q9Y6N6 1575 aa34.3■■■■□ 3.08
ZNF554-204ENST00000591265 MROH2BQ7Z745 1585 aa34.26■■■■□ 3.07
ZNF554-204ENST00000591265 THOC2Q8NI27 1593 aaKnown RBP34.2■■■■□ 3.07
ZNF554-204ENST00000591265 PDS5BQ9NTI5 1447 aa34.15■■■■□ 3.06
ZNF554-204ENST00000591265 CADPSQ9ULU8 1353 aa34■■■■□ 3.03
ZNF554-204ENST00000591265 KIF21AQ7Z4S6 1674 aa33.99■■■■□ 3.03
ZNF554-204ENST00000591265 MRC2Q9UBG0 1479 aa33.82■■■■□ 3
ZNF554-204ENST00000591265 WIZO95785 1651 aa33.8■■■■□ 3
ZNF554-204ENST00000591265 WDR62O43379 1518 aa33.74■■■□□ 2.99
ZNF554-204ENST00000591265 CEP164Q9UPV0 1460 aa33.63■■■□□ 2.97
ZNF554-204ENST00000591265 FANCD2Q9BXW9 1451 aa33.56■■■□□ 2.96
ZNF554-204ENST00000591265 CFTRP13569 1480 aa33.55■■■□□ 2.96
ZNF554-204ENST00000591265 RSF1Q96T23 1441 aaPredicted RBP33.51■■■□□ 2.95
ZNF554-204ENST00000591265 TRIM41Q8WV44 630 aa33.44■■■□□ 2.94
ZNF554-204ENST00000591265 TOP2AP11388 1531 aaKnown RBP33.42■■■□□ 2.94
ZNF554-204ENST00000591265 OSCARQ8IYS5 282 aa33.29■■■□□ 2.92
ZNF554-204ENST00000591265 URB2Q14146 1524 aaKnown RBP33.28■■■□□ 2.92
ZNF554-204ENST00000591265 PRDM2Q13029 1718 aa33.06■■■□□ 2.88
ZNF554-204ENST00000591265 CCDC88BA6NC98 1476 aa33.05■■■□□ 2.88
ZNF554-204ENST00000591265 IFT140Q96RY7 1462 aa32.99■■■□□ 2.87
ZNF554-204ENST00000591265 ABCC8Q09428 1581 aa32.9■■■□□ 2.86
ZNF554-204ENST00000591265 TOPBP1Q92547 1522 aa32.89■■■□□ 2.86
ZNF554-204ENST00000591265 ZNF608Q9ULD9 1512 aaPredicted RBP32.89■■■□□ 2.86
ZNF554-204ENST00000591265 RIMBP3CA6NJZ7 1639 aa32.75■■■□□ 2.83
ZNF554-204ENST00000591265 RIMBP3BA6NNM3 1639 aa32.75■■■□□ 2.83
ZNF554-204ENST00000591265 RIMBP3Q9UFD9 1639 aa32.75■■■□□ 2.83
ZNF554-204ENST00000591265 DNMBPQ6XZF7 1577 aa32.75■■■□□ 2.83
ZNF554-204ENST00000591265 EIF4G3O43432 1585 aaKnown RBP32.68■■■□□ 2.82
ZNF554-204ENST00000591265 ARHGEF11O15085 1522 aa32.67■■■□□ 2.82
ZNF554-204ENST00000591265 TARBP1Q13395 1621 aaKnown RBP32.6■■■□□ 2.81
ZNF554-204ENST00000591265 AQRO60306 1485 aaKnown RBP eCLIP32.59■■■□□ 2.81
ZNF554-204ENST00000591265 POLA1P09884 1462 aaPredicted RBP32.54■■■□□ 2.8
ZNF554-204ENST00000591265 CYB5RLQ6IPT4 315 aa32.47■■■□□ 2.79
ZNF554-204ENST00000591265 CHD1O14646 1710 aa32.44■■■□□ 2.78
ZNF554-204ENST00000591265 FBLN2P98095 1184 aa32.43■■■□□ 2.78
ZNF554-204ENST00000591265 SOGA1O94964 1423 aa32.43■■■□□ 2.78
ZNF554-204ENST00000591265 RAD54L2Q9Y4B4 1467 aa32.39■■■□□ 2.78
ZNF554-204ENST00000591265 TDRD9Q8NDG6 1382 aaKnown RBP32.35■■■□□ 2.77
ZNF554-204ENST00000591265 WDR97A6NE52 1622 aa32.33■■■□□ 2.77
ZNF554-204ENST00000591265 ARAP1Q96P48 1450 aa32.31■■■□□ 2.76
ZNF554-204ENST00000591265 FGD5Q6ZNL6 1462 aa32.29■■■□□ 2.76
ZNF554-204ENST00000591265 SNAPC4Q5SXM2 1469 aa32.24■■■□□ 2.75
ZNF554-204ENST00000591265 CUX1P39880 1505 aa32.21■■■□□ 2.75
ZNF554-204ENST00000591265 CHMP7Q8WUX9 453 aaPredicted RBP32.21■■■□□ 2.75
ZNF554-204ENST00000591265 MAGI1Q96QZ7 1491 aaPredicted RBP32.21■■■□□ 2.75
ZNF554-204ENST00000591265 TRHP20396 242 aaPredicted RBP32.18■■■□□ 2.74
ZNF554-204ENST00000591265 GRIN2BQ13224 1484 aa32.16■■■□□ 2.74
ZNF554-204ENST00000591265 CLASP1Q7Z460 1538 aa32.16■■■□□ 2.74
ZNF554-204ENST00000591265 SYNJ1O43426 1573 aa32.12■■■□□ 2.73
ZNF554-204ENST00000591265 SYNJ2O15056 1496 aa32.1■■■□□ 2.73
ZNF554-204ENST00000591265 GAPVD1Q14C86 1478 aa32.01■■■□□ 2.71
ZNF554-204ENST00000591265 ABCA10Q8WWZ4 1543 aa31.95■■■□□ 2.71
ZNF554-204ENST00000591265 PBRM1Q86U86 1689 aa31.91■■■□□ 2.7
ZNF554-204ENST00000591265 ABCA5Q8WWZ7 1642 aa31.87■■■□□ 2.69
ZNF554-204ENST00000591265 WRNQ14191 1432 aaPredicted RBP eCLIP31.8■■■□□ 2.68
ZNF554-204ENST00000591265 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
ZNF554-204ENST00000591265 GRIN2AQ12879 1464 aa31.73■■■□□ 2.67
ZNF554-204ENST00000591265 NUP160Q12769 1436 aa31.66■■■□□ 2.66
ZNF554-204ENST00000591265 ADAMTS12P58397 1594 aa31.64■■■□□ 2.65
ZNF554-204ENST00000591265 TOP2BQ02880 1626 aa31.64■■■□□ 2.65
ZNF554-204ENST00000591265 FHAD1B1AJZ9 1412 aa31.62■■■□□ 2.65
ZNF554-204ENST00000591265 BIVM-ERCC5R4GMW8 1640 aa31.62■■■□□ 2.65
ZNF554-204ENST00000591265 CEP170Q5SW79 1584 aa31.58■■■□□ 2.65
ZNF554-204ENST00000591265 ERCC6L2Q5T890 1561 aa31.56■■■□□ 2.64
ZNF554-204ENST00000591265 ERICH3Q5RHP9 1530 aa31.55■■■□□ 2.64
ZNF554-204ENST00000591265 SHROOM2Q13796 1616 aa31.51■■■□□ 2.63
ZNF554-204ENST00000591265 AEBP2Q6ZN18 517 aaPredicted RBP31.45■■■□□ 2.63
ZNF554-204ENST00000591265 JPH4Q96JJ6 628 aa31.37■■■□□ 2.61
ZNF554-204ENST00000591265 PRG4Q92954 1404 aaPredicted RBP31.36■■■□□ 2.61
ZNF554-204ENST00000591265 RUSC2Q8N2Y8 1516 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms