Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CLPXO76031 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.87□□□□□ -0.03
CLPXO76031 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 IGHGP-201ENST00000390555 1178 ntBASIC14.87□□□□□ -0.03
CLPXO76031 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.87□□□□□ -0.03
CLPXO76031 AL645929.1-201ENST00000420084 975 ntBASIC14.87□□□□□ -0.03
CLPXO76031 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.87□□□□□ -0.03
CLPXO76031 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.87□□□□□ -0.03
CLPXO76031 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.87□□□□□ -0.03
CLPXO76031 AC009154.2-201ENST00000621177 724 ntBASIC14.87□□□□□ -0.03
CLPXO76031 AL691432.3-201ENST00000621860 400 ntBASIC14.87□□□□□ -0.03
CLPXO76031 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.87□□□□□ -0.03
CLPXO76031 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.87□□□□□ -0.03
CLPXO76031 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.87□□□□□ -0.03
CLPXO76031 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.87□□□□□ -0.03
CLPXO76031 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLPXO76031 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLPXO76031 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLPXO76031 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLPXO76031 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CLPXO76031 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.86□□□□□ -0.03
CLPXO76031 AC096633.1-201ENST00000422446 749 ntBASIC14.86□□□□□ -0.03
CLPXO76031 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 GPR32P1-201ENST00000601788 811 ntBASIC14.86□□□□□ -0.03
CLPXO76031 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 AL139011.1-202ENST00000642063 584 ntBASIC14.86□□□□□ -0.03
CLPXO76031 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.86□□□□□ -0.03
CLPXO76031 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.86□□□□□ -0.03
CLPXO76031 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.86□□□□□ -0.03
CLPXO76031 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CLPXO76031 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.86□□□□□ -0.03
CLPXO76031 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 AC041040.2-201ENST00000622926 2899 ntBASIC14.86□□□□□ -0.03
CLPXO76031 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLPXO76031 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CLPXO76031 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLPXO76031 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLPXO76031 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLPXO76031 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLPXO76031 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLPXO76031 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLPXO76031 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLPXO76031 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLPXO76031 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
CLPXO76031 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.85□□□□□ -0.03
CLPXO76031 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLPXO76031 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.85□□□□□ -0.03
CLPXO76031 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLPXO76031 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLPXO76031 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms