Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CFAP99D6REC4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CFAP99D6REC4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFAP99D6REC4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFAP99D6REC4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFAP99D6REC4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFAP99D6REC4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFAP99D6REC4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFAP99D6REC4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.31■□□□□ 0.2
CFAP99D6REC4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CFAP99D6REC4 AC005052.1-201ENST00000625181 2492 ntBASIC16.3■□□□□ 0.2
CFAP99D6REC4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 AL136379.1-201ENST00000623471 2642 ntBASIC16.3■□□□□ 0.2
CFAP99D6REC4 ALOX12P2-203ENST00000570921 1945 ntBASIC16.3■□□□□ 0.2
CFAP99D6REC4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 RPSAP43-201ENST00000402237 625 ntBASIC16.3■□□□□ 0.2
CFAP99D6REC4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 YBX1P5-201ENST00000509441 847 ntBASIC16.3■□□□□ 0.2
CFAP99D6REC4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 PRYP6-201ENST00000514804 343 ntBASIC16.3■□□□□ 0.2
CFAP99D6REC4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 MIR4469-201ENST00000583919 79 ntBASIC16.3■□□□□ 0.2
CFAP99D6REC4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 AC005786.4-201ENST00000623369 682 ntBASIC16.3■□□□□ 0.2
CFAP99D6REC4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.3■□□□□ 0.2
CFAP99D6REC4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFAP99D6REC4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 TIMM8BP1-201ENST00000452384 211 ntBASIC16.29■□□□□ 0.2
CFAP99D6REC4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 AC112482.1-201ENST00000492080 688 ntBASIC16.29■□□□□ 0.2
CFAP99D6REC4 IGHV3-62-201ENST00000520057 340 ntBASIC16.29■□□□□ 0.2
CFAP99D6REC4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms