RNA–Protein interactions for RNA: ENST00000378533.3

SRPX-201, Transcript of sushi repeat containing protein X-linked, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRPX, Length 1,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPX-201ENST00000378533 NISCHQ9Y2I1 1504 aa37.51■■■■□ 3.6
SRPX-201ENST00000378533 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
SRPX-201ENST00000378533 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
SRPX-201ENST00000378533 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
SRPX-201ENST00000378533 ABCC9O60706 1549 aa31.05■■■□□ 2.56
SRPX-201ENST00000378533 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.56
SRPX-201ENST00000378533 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
SRPX-201ENST00000378533 SHROOM4Q9ULL8 1493 aa30.55■■■□□ 2.48
SRPX-201ENST00000378533 NACADO15069 1562 aa30.52■■■□□ 2.48
SRPX-201ENST00000378533 RB1CC1Q8TDY2 1594 aa30.28■■■□□ 2.44
SRPX-201ENST00000378533 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
SRPX-201ENST00000378533 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
SRPX-201ENST00000378533 SUPT5HO00267 1087 aaKnown RBP29.38■■■□□ 2.29
SRPX-201ENST00000378533 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
SRPX-201ENST00000378533 PABPN1Q86U42 306 aaKnown RBP eCLIP29.29■■■□□ 2.28
SRPX-201ENST00000378533 CECR2Q9BXF3 1484 aa29.15■■■□□ 2.26
SRPX-201ENST00000378533 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
SRPX-201ENST00000378533 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
SRPX-201ENST00000378533 MROH2BQ7Z745 1585 aa28.97■■■□□ 2.23
SRPX-201ENST00000378533 SMARCA4P51532 1647 aa28.84■■■□□ 2.21
SRPX-201ENST00000378533 WIZO95785 1651 aa28.72■■■□□ 2.19
SRPX-201ENST00000378533 PEG3Q9GZU2 1588 aa28.49■■■□□ 2.15
SRPX-201ENST00000378533 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
SRPX-201ENST00000378533 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
SRPX-201ENST00000378533 ATAD2BQ9ULI0 1458 aa28.41■■■□□ 2.14
SRPX-201ENST00000378533 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
SRPX-201ENST00000378533 BAZ1BQ9UIG0 1483 aaKnown RBP28.24■■■□□ 2.11
SRPX-201ENST00000378533 NCAPD3P42695 1498 aa28.18■■■□□ 2.1
SRPX-201ENST00000378533 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
SRPX-201ENST00000378533 HMGXB3Q12766 1538 aa28.12■■■□□ 2.09
SRPX-201ENST00000378533 CC2D2AQ9P2K1 1620 aa28.09■■■□□ 2.09
SRPX-201ENST00000378533 CHIC1Q5VXU3 224 aa28.07■■■□□ 2.08
SRPX-201ENST00000378533 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
SRPX-201ENST00000378533 CFTRP13569 1480 aa27.53■■■□□ 2
SRPX-201ENST00000378533 ABCC8Q09428 1581 aa27.52■■■□□ 2
SRPX-201ENST00000378533 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
SRPX-201ENST00000378533 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
SRPX-201ENST00000378533 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
SRPX-201ENST00000378533 PRDM2Q13029 1718 aa27.34■■□□□ 1.97
SRPX-201ENST00000378533 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
SRPX-201ENST00000378533 LAMC3Q9Y6N6 1575 aa27.23■■□□□ 1.95
SRPX-201ENST00000378533 NESP48681 1621 aa27.23■■□□□ 1.95
SRPX-201ENST00000378533 FANCD2Q9BXW9 1451 aa27.15■■□□□ 1.94
SRPX-201ENST00000378533 TOP2BQ02880 1626 aa27.14■■□□□ 1.94
SRPX-201ENST00000378533 FAM9AQ8IZU1 332 aaPredicted RBP27.13■■□□□ 1.93
SRPX-201ENST00000378533 BIVM-ERCC5R4GMW8 1640 aa27.1■■□□□ 1.93
SRPX-201ENST00000378533 CUX1P39880 1505 aa27.09■■□□□ 1.93
SRPX-201ENST00000378533 PDS5BQ9NTI5 1447 aa27.04■■□□□ 1.92
SRPX-201ENST00000378533 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
SRPX-201ENST00000378533 SOGA1O94964 1423 aa27■■□□□ 1.91
SRPX-201ENST00000378533 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
SRPX-201ENST00000378533 EEA1Q15075 1411 aa26.95■■□□□ 1.9
SRPX-201ENST00000378533 RUSC2Q8N2Y8 1516 aa26.9■■□□□ 1.9
SRPX-201ENST00000378533 KIF21AQ7Z4S6 1674 aa26.87■■□□□ 1.89
SRPX-201ENST00000378533 DNMBPQ6XZF7 1577 aa26.87■■□□□ 1.89
SRPX-201ENST00000378533 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
SRPX-201ENST00000378533 CSRNP3Q8WYN3 585 aa26.83■■□□□ 1.88
SRPX-201ENST00000378533 FGD5Q6ZNL6 1462 aa26.82■■□□□ 1.88
SRPX-201ENST00000378533 URB2Q14146 1524 aaKnown RBP26.81■■□□□ 1.88
SRPX-201ENST00000378533 EHMT2Q96KQ7 1210 aa26.74■■□□□ 1.87
SRPX-201ENST00000378533 POLA1P09884 1462 aaPredicted RBP26.71■■□□□ 1.87
SRPX-201ENST00000378533 KIF27Q86VH2 1401 aa26.7■■□□□ 1.87
SRPX-201ENST00000378533 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
SRPX-201ENST00000378533 ERCC6Q03468 1493 aa26.64■■□□□ 1.86
SRPX-201ENST00000378533 CUX2O14529 1486 aa26.64■■□□□ 1.85
SRPX-201ENST00000378533 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
SRPX-201ENST00000378533 ABCA10Q8WWZ4 1543 aa26.58■■□□□ 1.85
SRPX-201ENST00000378533 KIF21BO75037 1637 aa26.57■■□□□ 1.84
SRPX-201ENST00000378533 GOLGA3Q08378 1498 aa26.56■■□□□ 1.84
SRPX-201ENST00000378533 WDR62O43379 1518 aa26.53■■□□□ 1.84
SRPX-201ENST00000378533 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
SRPX-201ENST00000378533 UBTFP17480 764 aaKnown RBP26.49■■□□□ 1.83
SRPX-201ENST00000378533 IGF1RP08069 1367 aa26.48■■□□□ 1.83
SRPX-201ENST00000378533 TNIKQ9UKE5 1360 aa26.47■■□□□ 1.83
SRPX-201ENST00000378533 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
SRPX-201ENST00000378533 RAPGEF2Q9Y4G8 1499 aa26.46■■□□□ 1.83
SRPX-201ENST00000378533 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
SRPX-201ENST00000378533 TARBP1Q13395 1621 aaKnown RBP26.43■■□□□ 1.82
SRPX-201ENST00000378533 ERICH3Q5RHP9 1530 aa26.42■■□□□ 1.82
SRPX-201ENST00000378533 TDRD9Q8NDG6 1382 aaKnown RBP26.39■■□□□ 1.81
SRPX-201ENST00000378533 ABCA5Q8WWZ7 1642 aa26.35■■□□□ 1.81
SRPX-201ENST00000378533 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
SRPX-201ENST00000378533 CARMIL1Q5VZK9 1371 aa26.35■■□□□ 1.81
SRPX-201ENST00000378533 GAPVD1Q14C86 1478 aa26.33■■□□□ 1.81
SRPX-201ENST00000378533 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
SRPX-201ENST00000378533 CUL7Q14999 1698 aa26.25■■□□□ 1.79
SRPX-201ENST00000378533 AQRO60306 1485 aaKnown RBP eCLIP26.22■■□□□ 1.79
SRPX-201ENST00000378533 ZNF608Q9ULD9 1512 aaPredicted RBP26.2■■□□□ 1.78
SRPX-201ENST00000378533 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
SRPX-201ENST00000378533 GRIN2BQ13224 1484 aa26.15■■□□□ 1.78
SRPX-201ENST00000378533 CLIP1P30622 1438 aa26.14■■□□□ 1.78
SRPX-201ENST00000378533 EIF4G3O43432 1585 aaKnown RBP26.09■■□□□ 1.77
SRPX-201ENST00000378533 RANGAP1P46060 587 aaPredicted RBP26.07■■□□□ 1.76
SRPX-201ENST00000378533 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
SRPX-201ENST00000378533 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
SRPX-201ENST00000378533 SNAPC4Q5SXM2 1469 aa25.97■■□□□ 1.75
SRPX-201ENST00000378533 MAGI1Q96QZ7 1491 aaPredicted RBP25.93■■□□□ 1.74
SRPX-201ENST00000378533 CTTNBP2Q8WZ74 1663 aa25.93■■□□□ 1.74
SRPX-201ENST00000378533 VPS8Q8N3P4 1428 aa25.89■■□□□ 1.74
SRPX-201ENST00000378533 ARHGAP35Q9NRY4 1499 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 375.9 ms