Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
HTR1AP08908 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HTR1AP08908 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.92□□□□□ -0.02
HTR1AP08908 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HTR1AP08908 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.92□□□□□ -0.02
HTR1AP08908 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
HTR1AP08908 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.92□□□□□ -0.02
HTR1AP08908 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.92□□□□□ -0.02
HTR1AP08908 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.92□□□□□ -0.02
HTR1AP08908 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.92□□□□□ -0.02
HTR1AP08908 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 CHCHD2P8-201ENST00000429873 447 ntBASIC14.92□□□□□ -0.02
HTR1AP08908 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.92□□□□□ -0.02
HTR1AP08908 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.92□□□□□ -0.02
HTR1AP08908 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.92□□□□□ -0.02
HTR1AP08908 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.92□□□□□ -0.02
HTR1AP08908 NTF6B-201ENST00000591913 560 ntBASIC14.92□□□□□ -0.02
HTR1AP08908 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.92□□□□□ -0.02
HTR1AP08908 AL121672.3-201ENST00000608644 468 ntBASIC14.92□□□□□ -0.02
HTR1AP08908 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HTR1AP08908 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.92□□□□□ -0.02
HTR1AP08908 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HTR1AP08908 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.92□□□□□ -0.02
HTR1AP08908 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HTR1AP08908 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.92□□□□□ -0.02
HTR1AP08908 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HTR1AP08908 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.92□□□□□ -0.02
HTR1AP08908 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HTR1AP08908 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HTR1AP08908 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HTR1AP08908 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.91□□□□□ -0.02
HTR1AP08908 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.91□□□□□ -0.02
HTR1AP08908 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.91□□□□□ -0.02
HTR1AP08908 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.91□□□□□ -0.02
HTR1AP08908 PMPCAP1-201ENST00000508114 1576 ntBASIC14.91□□□□□ -0.02
HTR1AP08908 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
HTR1AP08908 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.91□□□□□ -0.02
HTR1AP08908 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.91□□□□□ -0.02
HTR1AP08908 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.91□□□□□ -0.02
HTR1AP08908 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.91□□□□□ -0.02
HTR1AP08908 AP005901.3-202ENST00000581653 237 ntBASIC14.91□□□□□ -0.02
HTR1AP08908 LINC01023-201ENST00000606054 436 ntBASIC14.91□□□□□ -0.02
HTR1AP08908 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.91□□□□□ -0.02
HTR1AP08908 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.91□□□□□ -0.02
HTR1AP08908 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 GRK6P1-201ENST00000400595 1711 ntBASIC14.91□□□□□ -0.02
HTR1AP08908 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms