Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.26■□□□□ 0.35
ZBED1O96006 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ZBED1O96006 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ZBED1O96006 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZBED1O96006 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.25■□□□□ 0.35
ZBED1O96006 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZBED1O96006 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.25■□□□□ 0.35
ZBED1O96006 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ZBED1O96006 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.25■□□□□ 0.35
ZBED1O96006 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ZBED1O96006 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.25■□□□□ 0.35
ZBED1O96006 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.25■□□□□ 0.35
ZBED1O96006 TSEN15P1-201ENST00000423257 515 ntBASIC17.25■□□□□ 0.35
ZBED1O96006 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.25■□□□□ 0.35
ZBED1O96006 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZBED1O96006 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.25■□□□□ 0.35
ZBED1O96006 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.25■□□□□ 0.35
ZBED1O96006 FOXO1B-201ENST00000504678 1527 ntBASIC17.25■□□□□ 0.35
ZBED1O96006 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZBED1O96006 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZBED1O96006 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZBED1O96006 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.25■□□□□ 0.35
ZBED1O96006 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
ZBED1O96006 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZBED1O96006 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZBED1O96006 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.24■□□□□ 0.35
ZBED1O96006 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZBED1O96006 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ZBED1O96006 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZBED1O96006 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.24■□□□□ 0.35
ZBED1O96006 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 AL139400.1-201ENST00000366220 510 ntBASIC17.24■□□□□ 0.35
ZBED1O96006 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ZBED1O96006 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.24■□□□□ 0.35
ZBED1O96006 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.24■□□□□ 0.35
ZBED1O96006 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 HLA-J-203ENST00000494367 1087 ntBASIC17.24■□□□□ 0.35
ZBED1O96006 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.24■□□□□ 0.35
ZBED1O96006 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.24■□□□□ 0.35
ZBED1O96006 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.24■□□□□ 0.35
ZBED1O96006 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.24■□□□□ 0.35
ZBED1O96006 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.24■□□□□ 0.35
ZBED1O96006 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZBED1O96006 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 AL162727.3-201ENST00000635661 2787 ntBASIC17.24■□□□□ 0.35
ZBED1O96006 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.24■□□□□ 0.35
ZBED1O96006 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 ME2P1-201ENST00000426028 1970 ntBASIC17.24■□□□□ 0.35
ZBED1O96006 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ZBED1O96006 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 AC005622.1-201ENST00000636801 1703 ntBASIC17.24■□□□□ 0.35
ZBED1O96006 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.24■□□□□ 0.35
ZBED1O96006 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZBED1O96006 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.23■□□□□ 0.35
ZBED1O96006 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZBED1O96006 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZBED1O96006 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.23■□□□□ 0.35
ZBED1O96006 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
ZBED1O96006 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.23■□□□□ 0.35
ZBED1O96006 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZBED1O96006 AC005052.1-201ENST00000625181 2492 ntBASIC17.23■□□□□ 0.35
ZBED1O96006 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.23■□□□□ 0.35
ZBED1O96006 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZBED1O96006 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.23■□□□□ 0.35
ZBED1O96006 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZBED1O96006 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms