Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.04■■■■□ 3.36
ZBED1O96006 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
ZBED1O96006 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.2
ZBED1O96006 AL356512.1-201ENST00000607453 1739 ntBASIC34.99■■■■□ 3.19
ZBED1O96006 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
ZBED1O96006 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
ZBED1O96006 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.71■■■■□ 3.15
ZBED1O96006 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.37■■■■□ 3.09
ZBED1O96006 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.07■■■■□ 3.04
ZBED1O96006 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.06■■■■□ 3.04
ZBED1O96006 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.04■■■■□ 3.04
ZBED1O96006 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.8■■■■□ 3
ZBED1O96006 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.78■■■■□ 3
ZBED1O96006 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.68■■■□□ 2.98
ZBED1O96006 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
ZBED1O96006 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.45■■■□□ 2.95
ZBED1O96006 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.38■■■□□ 2.93
ZBED1O96006 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.27■■■□□ 2.92
ZBED1O96006 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
ZBED1O96006 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.11■■■□□ 2.89
ZBED1O96006 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.04■■■□□ 2.88
ZBED1O96006 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
ZBED1O96006 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
ZBED1O96006 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
ZBED1O96006 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
ZBED1O96006 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
ZBED1O96006 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
ZBED1O96006 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ZBED1O96006 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
ZBED1O96006 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.41■■■□□ 2.78
ZBED1O96006 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
ZBED1O96006 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
ZBED1O96006 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.32■■■□□ 2.76
ZBED1O96006 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
ZBED1O96006 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
ZBED1O96006 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
ZBED1O96006 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.18■■■□□ 2.74
ZBED1O96006 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.16■■■□□ 2.74
ZBED1O96006 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
ZBED1O96006 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
ZBED1O96006 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.06■■■□□ 2.72
ZBED1O96006 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.01■■■□□ 2.71
ZBED1O96006 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ZBED1O96006 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
ZBED1O96006 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
ZBED1O96006 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ZBED1O96006 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.89■■■□□ 2.7
ZBED1O96006 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ZBED1O96006 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
ZBED1O96006 AC015813.7-201ENST00000623294 581 ntBASIC31.7■■■□□ 2.67
ZBED1O96006 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ZBED1O96006 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
ZBED1O96006 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZBED1O96006 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZBED1O96006 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
ZBED1O96006 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.51■■■□□ 2.64
ZBED1O96006 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ZBED1O96006 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ZBED1O96006 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.43■■■□□ 2.62
ZBED1O96006 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.41■■■□□ 2.62
ZBED1O96006 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZBED1O96006 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.35■■■□□ 2.61
ZBED1O96006 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZBED1O96006 AC006077.2-201ENST00000623591 457 ntBASIC31.28■■■□□ 2.6
ZBED1O96006 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.18■■■□□ 2.58
ZBED1O96006 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ZBED1O96006 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ZBED1O96006 ZNRF2P1-201ENST00000441407 443 ntBASIC31.13■■■□□ 2.57
ZBED1O96006 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
ZBED1O96006 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ZBED1O96006 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.1■■■□□ 2.57
ZBED1O96006 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
ZBED1O96006 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZBED1O96006 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ZBED1O96006 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ZBED1O96006 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ZBED1O96006 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
ZBED1O96006 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ZBED1O96006 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
ZBED1O96006 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
ZBED1O96006 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ZBED1O96006 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.81■■■□□ 2.52
ZBED1O96006 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ZBED1O96006 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
ZBED1O96006 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ZBED1O96006 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ZBED1O96006 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ZBED1O96006 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.67■■■□□ 2.5
ZBED1O96006 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ZBED1O96006 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
ZBED1O96006 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.65■■■□□ 2.5
ZBED1O96006 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
ZBED1O96006 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ZBED1O96006 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.6■■■□□ 2.49
ZBED1O96006 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ZBED1O96006 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.47■■■□□ 2.47
ZBED1O96006 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.47■■■□□ 2.47
ZBED1O96006 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ZBED1O96006 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.43■■■□□ 2.46
ZBED1O96006 AC145285.7-201ENST00000614819 1539 ntBASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms