Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 AC006449.5-201ENST00000610658 2098 ntBASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 AL627223.1-201ENST00000416693 442 ntBASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 PMS2P2-201ENST00000425039 1128 ntBASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 AC142381.1-201ENST00000426099 345 ntBASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 KRT8P23-201ENST00000560090 1207 ntBASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 AC004835.2-201ENST00000603762 682 ntBASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD3Q7Z3D4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 SLC25A39P2-201ENST00000537614 270 ntBASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD3Q7Z3D4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms