Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAB1AP62820 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB1AP62820 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.11
RAB1AP62820 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB1AP62820 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RAB1AP62820 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RAB1AP62820 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB1AP62820 ADH5P3-201ENST00000433842 1137 ntBASIC14.39□□□□□ -0.11
RAB1AP62820 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 TIMM8BP1-201ENST00000452384 211 ntBASIC14.39□□□□□ -0.11
RAB1AP62820 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.39□□□□□ -0.11
RAB1AP62820 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB1AP62820 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB1AP62820 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RAB1AP62820 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB1AP62820 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB1AP62820 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB1AP62820 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.39□□□□□ -0.11
RAB1AP62820 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB1AP62820 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
RAB1AP62820 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RAB1AP62820 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB1AP62820 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB1AP62820 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB1AP62820 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB1AP62820 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB1AP62820 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
RAB1AP62820 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.38□□□□□ -0.11
RAB1AP62820 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB1AP62820 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB1AP62820 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB1AP62820 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB1AP62820 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB1AP62820 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB1AP62820 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB1AP62820 MIR1233-2-201ENST00000408138 82 ntBASIC14.38□□□□□ -0.11
RAB1AP62820 MIR1233-1-201ENST00000408722 82 ntBASIC14.38□□□□□ -0.11
RAB1AP62820 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB1AP62820 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB1AP62820 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
RAB1AP62820 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
RAB1AP62820 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms