RNA–Protein interactions for RNA: ENST00000640949.1

GABRD-218, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5 BASIC

Gene GABRD, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-218ENST00000640949 NISCHQ9Y2I1 1504 aa39.22■■■■□ 3.87
GABRD-218ENST00000640949 CCDC180Q9P1Z9 1646 aa34.58■■■■□ 3.13
GABRD-218ENST00000640949 ABCC9O60706 1549 aa33.59■■■□□ 2.97
GABRD-218ENST00000640949 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
GABRD-218ENST00000640949 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
GABRD-218ENST00000640949 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.79
GABRD-218ENST00000640949 NACADO15069 1562 aa32.41■■■□□ 2.78
GABRD-218ENST00000640949 MYO15BQ96JP2 1530 aa32.39■■■□□ 2.78
GABRD-218ENST00000640949 RB1CC1Q8TDY2 1594 aa32.3■■■□□ 2.76
GABRD-218ENST00000640949 UNC13AQ9UPW8 1703 aa31.65■■■□□ 2.66
GABRD-218ENST00000640949 SCRIBQ14160 1630 aa31.61■■■□□ 2.65
GABRD-218ENST00000640949 PABPN1Q86U42 306 aaKnown RBP eCLIP31.59■■■□□ 2.65
GABRD-218ENST00000640949 BICRAQ9NZM4 1560 aa31.38■■■□□ 2.61
GABRD-218ENST00000640949 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
GABRD-218ENST00000640949 DNAJC5BQ9UF47 199 aa30.8■■■□□ 2.52
GABRD-218ENST00000640949 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
GABRD-218ENST00000640949 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
GABRD-218ENST00000640949 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.44
GABRD-218ENST00000640949 SMARCA4P51532 1647 aa30.3■■■□□ 2.44
GABRD-218ENST00000640949 CC2D2AQ9P2K1 1620 aa30.29■■■□□ 2.44
GABRD-218ENST00000640949 MROH2BQ7Z745 1585 aa30.26■■■□□ 2.43
GABRD-218ENST00000640949 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
GABRD-218ENST00000640949 ATAD2BQ9ULI0 1458 aa30.02■■■□□ 2.4
GABRD-218ENST00000640949 PEG3Q9GZU2 1588 aa30■■■□□ 2.39
GABRD-218ENST00000640949 SMARCA2P51531 1590 aa29.96■■■□□ 2.39
GABRD-218ENST00000640949 WIZO95785 1651 aa29.96■■■□□ 2.39
GABRD-218ENST00000640949 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
GABRD-218ENST00000640949 HMGXB3Q12766 1538 aa29.78■■■□□ 2.36
GABRD-218ENST00000640949 BAZ1BQ9UIG0 1483 aaKnown RBP29.76■■■□□ 2.35
GABRD-218ENST00000640949 SUPT5HO00267 1087 aaKnown RBP29.73■■■□□ 2.35
GABRD-218ENST00000640949 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
GABRD-218ENST00000640949 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
GABRD-218ENST00000640949 NESP48681 1621 aa29.12■■■□□ 2.25
GABRD-218ENST00000640949 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
GABRD-218ENST00000640949 LAMC3Q9Y6N6 1575 aa29.02■■■□□ 2.24
GABRD-218ENST00000640949 CFTRP13569 1480 aa29.02■■■□□ 2.24
GABRD-218ENST00000640949 ERCC6Q03468 1493 aa28.91■■■□□ 2.22
GABRD-218ENST00000640949 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
GABRD-218ENST00000640949 PRDM2Q13029 1718 aa28.81■■■□□ 2.2
GABRD-218ENST00000640949 FANCD2Q9BXW9 1451 aa28.73■■■□□ 2.19
GABRD-218ENST00000640949 KIF21AQ7Z4S6 1674 aa28.71■■■□□ 2.19
GABRD-218ENST00000640949 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
GABRD-218ENST00000640949 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
GABRD-218ENST00000640949 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
GABRD-218ENST00000640949 CUX2O14529 1486 aa28.44■■■□□ 2.14
GABRD-218ENST00000640949 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
GABRD-218ENST00000640949 ABCC8Q09428 1581 aa28.39■■■□□ 2.14
GABRD-218ENST00000640949 WDR62O43379 1518 aa28.37■■■□□ 2.13
GABRD-218ENST00000640949 CUX1P39880 1505 aa28.34■■■□□ 2.13
GABRD-218ENST00000640949 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
GABRD-218ENST00000640949 WRNQ14191 1432 aaPredicted RBP eCLIP28.33■■■□□ 2.13
GABRD-218ENST00000640949 DNMBPQ6XZF7 1577 aa28.32■■■□□ 2.12
GABRD-218ENST00000640949 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
GABRD-218ENST00000640949 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
GABRD-218ENST00000640949 BIVM-ERCC5R4GMW8 1640 aa28.2■■■□□ 2.11
GABRD-218ENST00000640949 FGD5Q6ZNL6 1462 aa28.14■■■□□ 2.09
GABRD-218ENST00000640949 POLA1P09884 1462 aaPredicted RBP28.13■■■□□ 2.09
GABRD-218ENST00000640949 CHIC1Q5VXU3 224 aa28.1■■■□□ 2.09
GABRD-218ENST00000640949 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
GABRD-218ENST00000640949 SOGA1O94964 1423 aa28.04■■■□□ 2.08
GABRD-218ENST00000640949 RAD54L2Q9Y4B4 1467 aa28.03■■■□□ 2.08
GABRD-218ENST00000640949 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
GABRD-218ENST00000640949 IFT140Q96RY7 1462 aa28■■■□□ 2.07
GABRD-218ENST00000640949 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
GABRD-218ENST00000640949 ABCA10Q8WWZ4 1543 aa27.89■■■□□ 2.06
GABRD-218ENST00000640949 WDR97A6NE52 1622 aa27.87■■■□□ 2.05
GABRD-218ENST00000640949 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
GABRD-218ENST00000640949 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.05
GABRD-218ENST00000640949 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
GABRD-218ENST00000640949 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
GABRD-218ENST00000640949 GAPVD1Q14C86 1478 aa27.71■■■□□ 2.03
GABRD-218ENST00000640949 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
GABRD-218ENST00000640949 KIF27Q86VH2 1401 aa27.68■■■□□ 2.02
GABRD-218ENST00000640949 GRIN2BQ13224 1484 aa27.62■■■□□ 2.01
GABRD-218ENST00000640949 PBRM1Q86U86 1689 aa27.6■■■□□ 2.01
GABRD-218ENST00000640949 FBLN2P98095 1184 aa27.59■■■□□ 2.01
GABRD-218ENST00000640949 IGF1RP08069 1367 aa27.57■■■□□ 2
GABRD-218ENST00000640949 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
GABRD-218ENST00000640949 OSCARQ8IYS5 282 aa27.55■■■□□ 2
GABRD-218ENST00000640949 DNAJC5Q9H3Z4 198 aa27.53■■■□□ 2
GABRD-218ENST00000640949 SNAPC4Q5SXM2 1469 aa27.5■■□□□ 1.99
GABRD-218ENST00000640949 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
GABRD-218ENST00000640949 EEA1Q15075 1411 aa27.48■■□□□ 1.99
GABRD-218ENST00000640949 MAGI1Q96QZ7 1491 aaPredicted RBP27.48■■□□□ 1.99
GABRD-218ENST00000640949 FAM9AQ8IZU1 332 aaPredicted RBP27.46■■□□□ 1.99
GABRD-218ENST00000640949 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
GABRD-218ENST00000640949 ADAMTS12P58397 1594 aa27.4■■□□□ 1.98
GABRD-218ENST00000640949 FHAD1B1AJZ9 1412 aa27.39■■□□□ 1.98
GABRD-218ENST00000640949 CARMIL1Q5VZK9 1371 aa27.39■■□□□ 1.97
GABRD-218ENST00000640949 CUL7Q14999 1698 aa27.38■■□□□ 1.97
GABRD-218ENST00000640949 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
GABRD-218ENST00000640949 CHD1O14646 1710 aa27.32■■□□□ 1.96
GABRD-218ENST00000640949 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
GABRD-218ENST00000640949 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
GABRD-218ENST00000640949 RAPGEF2Q9Y4G8 1499 aa27.26■■□□□ 1.95
GABRD-218ENST00000640949 KIF21BO75037 1637 aa27.18■■□□□ 1.94
GABRD-218ENST00000640949 NUP160Q12769 1436 aa27.14■■□□□ 1.94
GABRD-218ENST00000640949 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
GABRD-218ENST00000640949 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
GABRD-218ENST00000640949 GOLGA3Q08378 1498 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms