Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 AC093724.1-201ENST00000448659 1027 ntBASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 RARRES2P9-201ENST00000565168 469 ntBASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 AL355385.1-201ENST00000606123 409 ntBASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 MIR6080-201ENST00000617359 66 ntBASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 LINC01144-201ENST00000626198 1710 ntBASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 GGT3P-204ENST00000453783 1664 ntBASIC15.48■□□□□ 0.07
MKKSQ9NPJ1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 TUBB3P1-201ENST00000405796 1332 ntBASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 FAM220BP-201ENST00000377689 816 ntBASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 AP3S2-216ENST00000617003 1561 ntBASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 FLJ16779-201ENST00000612722 7638 ntBASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 FOXO1B-201ENST00000504678 1527 ntBASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MKKSQ9NPJ1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 KLF2P3-201ENST00000451977 1087 ntBASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 AC018529.1-201ENST00000613063 361 ntBASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MKKSQ9NPJ1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MKKSQ9NPJ1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MKKSQ9NPJ1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms