RNA–Protein interactions for RNA: ENST00000361478.1

PJA1-201, Transcript of praja ring finger ubiquitin ligase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PJA1, Length 2,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1-201ENST00000361478 NISCHQ9Y2I1 1504 aa33.2■■■□□ 2.91
PJA1-201ENST00000361478 SHROOM4Q9ULL8 1493 aa28.84■■■□□ 2.21
PJA1-201ENST00000361478 HRCP23327 699 aa28.8■■■□□ 2.2
PJA1-201ENST00000361478 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
PJA1-201ENST00000361478 PELP1Q8IZL8 1130 aaKnown RBP28.56■■■□□ 2.16
PJA1-201ENST00000361478 MYO15BQ96JP2 1530 aa28.45■■■□□ 2.14
PJA1-201ENST00000361478 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
PJA1-201ENST00000361478 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
PJA1-201ENST00000361478 PCGF6Q9BYE7 350 aa28.19■■■□□ 2.1
PJA1-201ENST00000361478 PPARGC1BQ86YN6 1023 aaKnown RBP28.05■■■□□ 2.08
PJA1-201ENST00000361478 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
PJA1-201ENST00000361478 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
PJA1-201ENST00000361478 MYT1Q01538 1121 aa27.76■■■□□ 2.03
PJA1-201ENST00000361478 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
PJA1-201ENST00000361478 LOC105371045A0A1W2PR82 267 aa27.47■■□□□ 1.99
PJA1-201ENST00000361478 ZEB1P37275 1124 aaPredicted RBP27.23■■□□□ 1.95
PJA1-201ENST00000361478 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
PJA1-201ENST00000361478 SCAF1Q9H7N4 1312 aaKnown RBP27.06■■□□□ 1.92
PJA1-201ENST00000361478 ABCC9O60706 1549 aa26.82■■□□□ 1.88
PJA1-201ENST00000361478 TRIM41Q8WV44 630 aa26.62■■□□□ 1.85
PJA1-201ENST00000361478 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
PJA1-201ENST00000361478 ACIN1Q9UKV3 1341 aaKnown RBP26.5■■□□□ 1.83
PJA1-201ENST00000361478 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
PJA1-201ENST00000361478 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
PJA1-201ENST00000361478 NEUROD1Q13562 356 aa26.39■■□□□ 1.81
PJA1-201ENST00000361478 TTBK1Q5TCY1 1321 aaPredicted RBP26.35■■□□□ 1.81
PJA1-201ENST00000361478 SCRIBQ14160 1630 aa26.23■■□□□ 1.79
PJA1-201ENST00000361478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
PJA1-201ENST00000361478 GTF3C3Q9Y5Q9 886 aa26.19■■□□□ 1.78
PJA1-201ENST00000361478 CENPBP07199 599 aaPredicted RBP26.17■■□□□ 1.78
PJA1-201ENST00000361478 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
PJA1-201ENST00000361478 EHMT2Q96KQ7 1210 aa26.16■■□□□ 1.78
PJA1-201ENST00000361478 DIEXFQ68CQ4 756 aaKnown RBP26.14■■□□□ 1.77
PJA1-201ENST00000361478 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
PJA1-201ENST00000361478 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
PJA1-201ENST00000361478 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
PJA1-201ENST00000361478 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
PJA1-201ENST00000361478 WIZO95785 1651 aa25.78■■□□□ 1.72
PJA1-201ENST00000361478 ZNF316A6NFI3 1004 aaPredicted RBP25.74■■□□□ 1.71
PJA1-201ENST00000361478 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
PJA1-201ENST00000361478 BCL11AQ9H165 835 aa25.67■■□□□ 1.7
PJA1-201ENST00000361478 CEP162Q5TB80 1403 aa25.64■■□□□ 1.7
PJA1-201ENST00000361478 TNIKQ9UKE5 1360 aa25.55■■□□□ 1.68
PJA1-201ENST00000361478 NACADO15069 1562 aa25.55■■□□□ 1.68
PJA1-201ENST00000361478 YTHDC1Q96MU7 727 aaKnown RBP25.52■■□□□ 1.68
PJA1-201ENST00000361478 CCDC88BA6NC98 1476 aa25.52■■□□□ 1.68
PJA1-201ENST00000361478 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
PJA1-201ENST00000361478 MIER1Q8N108 512 aa25.48■■□□□ 1.67
PJA1-201ENST00000361478 SOGA1O94964 1423 aa25.39■■□□□ 1.66
PJA1-201ENST00000361478 EEA1Q15075 1411 aa25.38■■□□□ 1.65
PJA1-201ENST00000361478 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
PJA1-201ENST00000361478 CSRNP3Q8WYN3 585 aa25.29■■□□□ 1.64
PJA1-201ENST00000361478 PRKCSHP14314 528 aaPredicted RBP25.28■■□□□ 1.64
PJA1-201ENST00000361478 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
PJA1-201ENST00000361478 GOLGA3Q08378 1498 aa25.25■■□□□ 1.63
PJA1-201ENST00000361478 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
PJA1-201ENST00000361478 UBTFP17480 764 aaKnown RBP25.22■■□□□ 1.63
PJA1-201ENST00000361478 CLSPNQ9HAW4 1339 aa25.18■■□□□ 1.62
PJA1-201ENST00000361478 ANP32EQ9BTT0 268 aa25.17■■□□□ 1.62
PJA1-201ENST00000361478 HNRNPUL2Q1KMD3 747 aaKnown RBP25.15■■□□□ 1.62
PJA1-201ENST00000361478 SMARCA4P51532 1647 aa25.13■■□□□ 1.61
PJA1-201ENST00000361478 SUPT16HQ9Y5B9 1047 aaKnown RBP25.05■■□□□ 1.6
PJA1-201ENST00000361478 KIF21BO75037 1637 aa25.03■■□□□ 1.6
PJA1-201ENST00000361478 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
PJA1-201ENST00000361478 VPS8Q8N3P4 1428 aa25■■□□□ 1.59
PJA1-201ENST00000361478 CLIP1P30622 1438 aa24.99■■□□□ 1.59
PJA1-201ENST00000361478 TSHZ2Q9NRE2 1034 aa24.88■■□□□ 1.57
PJA1-201ENST00000361478 BAZ1BQ9UIG0 1483 aaKnown RBP24.88■■□□□ 1.57
PJA1-201ENST00000361478 DHX57Q6P158 1386 aaKnown RBP24.86■■□□□ 1.57
PJA1-201ENST00000361478 ERICH6Q7L0X2 663 aa24.82■■□□□ 1.56
PJA1-201ENST00000361478 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
PJA1-201ENST00000361478 APLP2Q06481 763 aa24.82■■□□□ 1.56
PJA1-201ENST00000361478 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
PJA1-201ENST00000361478 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.55
PJA1-201ENST00000361478 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
PJA1-201ENST00000361478 CUX2O14529 1486 aa24.59■■□□□ 1.53
PJA1-201ENST00000361478 RRBP1Q9P2E9 1410 aaKnown RBP24.57■■□□□ 1.52
PJA1-201ENST00000361478 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
PJA1-201ENST00000361478 KCNH8Q96L42 1107 aa24.49■■□□□ 1.51
PJA1-201ENST00000361478 ERICH3Q5RHP9 1530 aa24.49■■□□□ 1.51
PJA1-201ENST00000361478 RANGAP1P46060 587 aaPredicted RBP24.48■■□□□ 1.51
PJA1-201ENST00000361478 KANK4Q5T7N3 995 aaPredicted RBP24.48■■□□□ 1.51
PJA1-201ENST00000361478 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
PJA1-201ENST00000361478 PRXQ9BXM0 1461 aa24.42■■□□□ 1.5
PJA1-201ENST00000361478 BCANQ96GW7 911 aa24.38■■□□□ 1.49
PJA1-201ENST00000361478 FKBP8Q14318 412 aa24.38■■□□□ 1.49
PJA1-201ENST00000361478 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
PJA1-201ENST00000361478 MAPKBP1O60336 1514 aa24.36■■□□□ 1.49
PJA1-201ENST00000361478 BIVM-ERCC5R4GMW8 1640 aa24.34■■□□□ 1.49
PJA1-201ENST00000361478 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
PJA1-201ENST00000361478 RBM19Q9Y4C8 960 aaKnown RBP24.31■■□□□ 1.48
PJA1-201ENST00000361478 ATAD2BQ9ULI0 1458 aa24.28■■□□□ 1.48
PJA1-201ENST00000361478 RAB3GAP2Q9H2M9 1393 aa24.27■■□□□ 1.48
PJA1-201ENST00000361478 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
PJA1-201ENST00000361478 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
PJA1-201ENST00000361478 PPP1R15AO75807 674 aaPredicted RBP24.2■■□□□ 1.46
PJA1-201ENST00000361478 NEFLP07196 543 aa24.2■■□□□ 1.46
PJA1-201ENST00000361478 ARHGAP35Q9NRY4 1499 aa24.18■■□□□ 1.46
PJA1-201ENST00000361478 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
PJA1-201ENST00000361478 CCER2I3L3R5 266 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms