Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 SDC2-203ENST00000519587 557 ntTSL 413.25□□□□□ -0.291e-8■□□□□ 8.1
NCBP2P52298 MANBAL-203ENST00000397150 620 ntTSL 5 BASIC10.08□□□□□ -0.81e-8■□□□□ 8.1
NCBP2P52298 SDC2-207ENST00000522911 677 ntTSL 3 BASIC8.41□□□□□ -1.061e-8■□□□□ 8.1
NCBP2P52298 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.61■■□□□ 1.216e-11■□□□□ 8.1
NCBP2P52298 FCGRT-208ENST00000595881 2681 ntTSL 218.19■□□□□ 0.56e-11■□□□□ 8.1
NCBP2P52298 FCGRT-214ENST00000598927 1616 ntTSL 517.03■□□□□ 0.326e-11■□□□□ 8.1
NCBP2P52298 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.316e-11■□□□□ 8.1
NCBP2P52298 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.316e-11■□□□□ 8.1
NCBP2P52298 FCGRT-209ENST00000596147 383 ntTSL 316.27■□□□□ 0.26e-11■□□□□ 8.1
NCBP2P52298 FCGRT-218ENST00000600273 582 ntTSL 215.69■□□□□ 0.16e-11■□□□□ 8.1
NCBP2P52298 FCGRT-216ENST00000599701 579 ntTSL 214.44□□□□□ -0.16e-11■□□□□ 8.1
NCBP2P52298 FCGRT-206ENST00000594823 819 ntTSL 513.75□□□□□ -0.216e-11■□□□□ 8.1
NCBP2P52298 FCGRT-213ENST00000598491 578 ntTSL 513.38□□□□□ -0.276e-11■□□□□ 8.1
NCBP2P52298 FCGRT-207ENST00000595677 714 ntTSL 513.32□□□□□ -0.286e-11■□□□□ 8.1
NCBP2P52298 APOC4-APOC2-201ENST00000585685 1829 ntTSL 515.6■□□□□ 0.091e-14■□□□□ 8.1
NCBP2P52298 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.71e-14■□□□□ 8.1
NCBP2P52298 APOC4-APOC2-202ENST00000589057 680 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.811e-14■□□□□ 8.1
NCBP2P52298 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.35□□□□□ -1.231e-14■□□□□ 8.1
NCBP2P52298 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.63□□□□□ -1.511e-14■□□□□ 8.1
NCBP2P52298 L3MBTL1-214ENST00000473289 590 ntTSL 216.94■□□□□ 0.32e-8■□□□□ 8.1
NCBP2P52298 L3MBTL1-209ENST00000439769 460 ntTSL 416.57■□□□□ 0.242e-8■□□□□ 8.1
NCBP2P52298 L3MBTL1-212ENST00000468336 751 ntTSL 215.89■□□□□ 0.132e-8■□□□□ 8.1
NCBP2P52298 L3MBTL1-208ENST00000434666 573 ntTSL 415.22■□□□□ 0.032e-8■□□□□ 8.1
NCBP2P52298 L3MBTL1-211ENST00000457824 582 ntTSL 315.03■□□□□ -02e-8■□□□□ 8.1
NCBP2P52298 L3MBTL1-207ENST00000430781 903 ntTSL 1 (best)14.37□□□□□ -0.112e-8■□□□□ 8.1
NCBP2P52298 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.242e-8■□□□□ 8.1
NCBP2P52298 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.282e-8■□□□□ 8.1
NCBP2P52298 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.42e-8■□□□□ 8.1
NCBP2P52298 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.442e-8■□□□□ 8.1
NCBP2P52298 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.58■□□□□ 0.246e-7■□□□□ 8.1
NCBP2P52298 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.65■□□□□ 0.16e-7■□□□□ 8.1
NCBP2P52298 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.056e-7■□□□□ 8.1
NCBP2P52298 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.65□□□□□ -0.066e-7■□□□□ 8.1
NCBP2P52298 GSTO1-205ENST00000470554 547 ntTSL 213□□□□□ -0.336e-7■□□□□ 8.1
NCBP2P52298 GSTO1-206ENST00000493946 874 ntTSL 211.9□□□□□ -0.56e-7■□□□□ 8.1
NCBP2P52298 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.38■□□□□ 0.539e-10■□□□□ 8.1
NCBP2P52298 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.29■□□□□ 0.369e-10■□□□□ 8.1
NCBP2P52298 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.42■□□□□ 0.229e-10■□□□□ 8.1
NCBP2P52298 SFI1-206ENST00000417682 1817 ntTSL 516.1■□□□□ 0.179e-10■□□□□ 8.1
NCBP2P52298 SFI1-228ENST00000524296 2108 ntTSL 514.76□□□□□ -0.059e-10■□□□□ 8.1
NCBP2P52298 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.31□□□□□ -0.129e-10■□□□□ 8.1
NCBP2P52298 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.299e-10■□□□□ 8.1
NCBP2P52298 SFI1-202ENST00000382162 5250 ntTSL 212.93□□□□□ -0.349e-10■□□□□ 8.1
NCBP2P52298 SFI1-212ENST00000452250 2625 ntTSL 212.88□□□□□ -0.359e-10■□□□□ 8.1
NCBP2P52298 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC12.54□□□□□ -0.41e-69■□□□□ 8.1
NCBP2P52298 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.529e-10■□□□□ 8.1
NCBP2P52298 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.639e-10■□□□□ 8.1
NCBP2P52298 SFI1-204ENST00000400289 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.779e-10■□□□□ 8.1
NCBP2P52298 SNX5-206ENST00000469704 696 ntTSL 324.4■■□□□ 1.52e-48■□□□□ 8.1
NCBP2P52298 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.222e-48■□□□□ 8.1
NCBP2P52298 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22■■□□□ 1.112e-48■□□□□ 8.1
NCBP2P52298 SNX5-217ENST00000606557 1087 ntBASIC21.37■■□□□ 1.012e-48■□□□□ 8.1
NCBP2P52298 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.91■□□□□ 0.462e-48■□□□□ 8.1
NCBP2P52298 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17■□□□□ 0.312e-48■□□□□ 8.1
NCBP2P52298 SNX5-214ENST00000490175 2025 ntTSL 1 (best)15.22■□□□□ 0.032e-48■□□□□ 8.1
NCBP2P52298 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.022e-8■□□□□ 8.1
NCBP2P52298 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.092e-48■□□□□ 8.1
NCBP2P52298 RPS17-203ENST00000559273 580 ntTSL 214.18□□□□□ -0.142e-8■□□□□ 8.1
NCBP2P52298 DHX33-203ENST00000572490 2564 ntTSL 1 (best)13.84□□□□□ -0.192e-8■□□□□ 8.1
NCBP2P52298 RPS17-204ENST00000559776 760 ntTSL 213.27□□□□□ -0.292e-8■□□□□ 8.1
NCBP2P52298 OVOL2-204ENST00000486776 550 ntTSL 313.24□□□□□ -0.292e-48■□□□□ 8.1
NCBP2P52298 RPS17-205ENST00000560229 776 ntTSL 1 (best)12.22□□□□□ -0.452e-8■□□□□ 8.1
NCBP2P52298 AC245033.1-201ENST00000562833 880 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.042e-8■□□□□ 8.1
NCBP2P52298 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.7□□□□□ -1.182e-8■□□□□ 8.1
NCBP2P52298 RPS17-207ENST00000560639 932 ntTSL 54.36□□□□□ -1.712e-8■□□□□ 8.1
NCBP2P52298 RPS17-202ENST00000558397 583 ntTSL 34.34□□□□□ -1.712e-8■□□□□ 8.1
NCBP2P52298 SNX5-207ENST00000474883 695 ntTSL 53.36□□□□□ -1.872e-48■□□□□ 8.1
NCBP2P52298 NDUFB1-205ENST00000556555 568 ntTSL 320.36■□□□□ 0.858e-7■□□□□ 8
NCBP2P52298 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.48■□□□□ 0.558e-7■□□□□ 8
NCBP2P52298 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.468e-7■□□□□ 8
NCBP2P52298 IL4I1-208ENST00000601717 2261 ntTSL 1 (best)17.88■□□□□ 0.458e-7■□□□□ 8
NCBP2P52298 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.438e-7■□□□□ 8
NCBP2P52298 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.378e-7■□□□□ 8
NCBP2P52298 LRP6-202ENST00000535731 562 ntTSL 317.21■□□□□ 0.358e-7■□□□□ 8
NCBP2P52298 CDKN1A-206ENST00000462537 553 ntTSL 317.07■□□□□ 0.328e-7■□□□□ 8
NCBP2P52298 TIAL1-210ENST00000479729 485 ntTSL 316.42■□□□□ 0.226e-11■□□□□ 8
NCBP2P52298 CDKN1A-205ENST00000459970 604 ntTSL 516.4■□□□□ 0.228e-7■□□□□ 8
NCBP2P52298 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.218e-7■□□□□ 8
NCBP2P52298 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.188e-7■□□□□ 8
NCBP2P52298 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.188e-7■□□□□ 8
NCBP2P52298 RRP7A-203ENST00000483303 580 ntTSL 315.98■□□□□ 0.158e-7■□□□□ 8
NCBP2P52298 IL4I1-206ENST00000596022 747 ntTSL 215.79■□□□□ 0.128e-7■□□□□ 8
NCBP2P52298 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.118e-7■□□□□ 8
NCBP2P52298 CDKN1A-207ENST00000478800 616 ntTSL 215.64■□□□□ 0.098e-7■□□□□ 8
NCBP2P52298 TIAL1-211ENST00000489822 2222 ntTSL 215.51■□□□□ 0.076e-11■□□□□ 8
NCBP2P52298 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.058e-7■□□□□ 8
NCBP2P52298 NUP62-206ENST00000595463 563 ntTSL 414.75□□□□□ -0.058e-7■□□□□ 8
NCBP2P52298 NUP62-204ENST00000594673 564 ntTSL 514.7□□□□□ -0.068e-7■□□□□ 8
NCBP2P52298 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.098e-7■□□□□ 8
NCBP2P52298 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.48□□□□□ -0.098e-7■□□□□ 8
NCBP2P52298 RRP7A-202ENST00000416699 687 ntTSL 514.38□□□□□ -0.118e-7■□□□□ 8
NCBP2P52298 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.16□□□□□ -0.148e-7■□□□□ 8
NCBP2P52298 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.188e-7■□□□□ 8
NCBP2P52298 TIAL1-213ENST00000497671 2321 ntTSL 1 (best)13.89□□□□□ -0.196e-11■□□□□ 8
NCBP2P52298 NUP62-219ENST00000599830 588 ntTSL 413.5□□□□□ -0.258e-7■□□□□ 8
NCBP2P52298 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.288e-7■□□□□ 8
NCBP2P52298 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.318e-7■□□□□ 8
NCBP2P52298 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.91□□□□□ -0.348e-7■□□□□ 8
NCBP2P52298 ATF7-211ENST00000589726 379 ntTSL 312.63□□□□□ -0.398e-7■□□□□ 8
NCBP2P52298 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.548e-7■□□□□ 8
Retrieved 100 of 18,329 protein–RNA pairs in 2848.1 ms