RNA–Protein interactions for RNA: ENST00000524296.5

SFI1-228, Transcript of SFI1 centrin binding protein, humanhuman

TSL 5

Gene SFI1, Length 2,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-228ENST00000524296 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
SFI1-228ENST00000524296 CCDC180Q9P1Z9 1646 aa28.62■■■□□ 2.17
SFI1-228ENST00000524296 ZCCHC6Q5VYS8 1495 aaKnown RBP28■■■□□ 2.07
SFI1-228ENST00000524296 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.02
SFI1-228ENST00000524296 DCAF1Q9Y4B6 1507 aa27.32■■□□□ 1.96
SFI1-228ENST00000524296 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
SFI1-228ENST00000524296 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
SFI1-228ENST00000524296 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
SFI1-228ENST00000524296 ABCC9O60706 1549 aa26.7■■□□□ 1.87
SFI1-228ENST00000524296 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
SFI1-228ENST00000524296 NACADO15069 1562 aa26.48■■□□□ 1.83
SFI1-228ENST00000524296 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
SFI1-228ENST00000524296 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
SFI1-228ENST00000524296 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
SFI1-228ENST00000524296 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.73
SFI1-228ENST00000524296 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
SFI1-228ENST00000524296 HRCP23327 699 aa25.82■■□□□ 1.72
SFI1-228ENST00000524296 MROH2BQ7Z745 1585 aa25.74■■□□□ 1.71
SFI1-228ENST00000524296 WIZO95785 1651 aa25.61■■□□□ 1.69
SFI1-228ENST00000524296 PCGF6Q9BYE7 350 aa25.61■■□□□ 1.69
SFI1-228ENST00000524296 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
SFI1-228ENST00000524296 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
SFI1-228ENST00000524296 LOC105371045A0A1W2PR82 267 aa25.47■■□□□ 1.67
SFI1-228ENST00000524296 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
SFI1-228ENST00000524296 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.641e-6■■■■□ 22
SFI1-228ENST00000524296 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
SFI1-228ENST00000524296 TRIM26Q12899 539 aaPredicted RBP25.21■■□□□ 1.63
SFI1-228ENST00000524296 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
SFI1-228ENST00000524296 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
SFI1-228ENST00000524296 PPARGC1BQ86YN6 1023 aaKnown RBP25.11■■□□□ 1.61
SFI1-228ENST00000524296 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
SFI1-228ENST00000524296 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
SFI1-228ENST00000524296 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
SFI1-228ENST00000524296 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
SFI1-228ENST00000524296 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.57
SFI1-228ENST00000524296 ZEB1P37275 1124 aaPredicted RBP24.8■■□□□ 1.56
SFI1-228ENST00000524296 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
SFI1-228ENST00000524296 BAZ1BQ9UIG0 1483 aaKnown RBP24.71■■□□□ 1.55
SFI1-228ENST00000524296 EHMT2Q96KQ7 1210 aa24.53■■□□□ 1.52
SFI1-228ENST00000524296 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
SFI1-228ENST00000524296 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
SFI1-228ENST00000524296 WRNQ14191 1432 aaPredicted RBP eCLIP24.41■■□□□ 1.5
SFI1-228ENST00000524296 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
SFI1-228ENST00000524296 SOGA1O94964 1423 aa24.39■■□□□ 1.49
SFI1-228ENST00000524296 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
SFI1-228ENST00000524296 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
SFI1-228ENST00000524296 EEA1Q15075 1411 aa24.23■■□□□ 1.47
SFI1-228ENST00000524296 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
SFI1-228ENST00000524296 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
SFI1-228ENST00000524296 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
SFI1-228ENST00000524296 CC2D2AQ9P2K1 1620 aa24.16■■□□□ 1.46
SFI1-228ENST00000524296 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
SFI1-228ENST00000524296 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
SFI1-228ENST00000524296 CFTRP13569 1480 aa24.11■■□□□ 1.45
SFI1-228ENST00000524296 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
SFI1-228ENST00000524296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
SFI1-228ENST00000524296 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
SFI1-228ENST00000524296 GOLGA3Q08378 1498 aa24.03■■□□□ 1.44
SFI1-228ENST00000524296 KIF21BO75037 1637 aa24.02■■□□□ 1.44
SFI1-228ENST00000524296 CUX1P39880 1505 aa24.02■■□□□ 1.44
SFI1-228ENST00000524296 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
SFI1-228ENST00000524296 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
SFI1-228ENST00000524296 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
SFI1-228ENST00000524296 RAPGEF2Q9Y4G8 1499 aa23.85■■□□□ 1.41
SFI1-228ENST00000524296 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
SFI1-228ENST00000524296 SCAF1Q9H7N4 1312 aaKnown RBP23.82■■□□□ 1.4
SFI1-228ENST00000524296 MYT1Q01538 1121 aa23.76■■□□□ 1.39
SFI1-228ENST00000524296 PRXQ9BXM0 1461 aa23.72■■□□□ 1.39
SFI1-228ENST00000524296 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
SFI1-228ENST00000524296 CLIP1P30622 1438 aa23.7■■□□□ 1.38
SFI1-228ENST00000524296 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
SFI1-228ENST00000524296 DIEXFQ68CQ4 756 aaKnown RBP23.68■■□□□ 1.38
SFI1-228ENST00000524296 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
SFI1-228ENST00000524296 NESP48681 1621 aa23.67■■□□□ 1.38
SFI1-228ENST00000524296 VPS8Q8N3P4 1428 aa23.65■■□□□ 1.38
SFI1-228ENST00000524296 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.37
SFI1-228ENST00000524296 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
SFI1-228ENST00000524296 CUX2O14529 1486 aa23.58■■□□□ 1.36
SFI1-228ENST00000524296 DNMBPQ6XZF7 1577 aa23.55■■□□□ 1.36
SFI1-228ENST00000524296 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
SFI1-228ENST00000524296 DNAJC5BQ9UF47 199 aa23.53■■□□□ 1.36
SFI1-228ENST00000524296 ZNF316A6NFI3 1004 aaPredicted RBP23.51■■□□□ 1.35
SFI1-228ENST00000524296 CENPBP07199 599 aaPredicted RBP23.5■■□□□ 1.35
SFI1-228ENST00000524296 NEUROD1Q13562 356 aa23.5■■□□□ 1.35
SFI1-228ENST00000524296 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
SFI1-228ENST00000524296 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
SFI1-228ENST00000524296 APLP2Q06481 763 aa23.47■■□□□ 1.35
SFI1-228ENST00000524296 IGF1RP08069 1367 aa23.46■■□□□ 1.35
SFI1-228ENST00000524296 ARAP1Q96P48 1450 aa23.45■■□□□ 1.35
SFI1-228ENST00000524296 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
SFI1-228ENST00000524296 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
SFI1-228ENST00000524296 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
SFI1-228ENST00000524296 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
SFI1-228ENST00000524296 KIF21AQ7Z4S6 1674 aa23.4■■□□□ 1.34
SFI1-228ENST00000524296 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.33
SFI1-228ENST00000524296 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
SFI1-228ENST00000524296 CARMIL1Q5VZK9 1371 aa23.34■■□□□ 1.33
SFI1-228ENST00000524296 ARHGAP35Q9NRY4 1499 aa23.33■■□□□ 1.33
SFI1-228ENST00000524296 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
SFI1-228ENST00000524296 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms