RNA–Protein interactions for RNA: ENST00000589726.1

ATF7-211, Transcript of activating transcription factor 7, humanhuman

TSL 3

Gene ATF7, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7-211ENST00000589726 NISCHQ9Y2I1 1504 aa32.9■■■□□ 2.86
ATF7-211ENST00000589726 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
ATF7-211ENST00000589726 ABCC9O60706 1549 aa28.14■■■□□ 2.1
ATF7-211ENST00000589726 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
ATF7-211ENST00000589726 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
ATF7-211ENST00000589726 NACADO15069 1562 aa27.16■■□□□ 1.94
ATF7-211ENST00000589726 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
ATF7-211ENST00000589726 MYO15BQ96JP2 1530 aa27.1■■□□□ 1.93
ATF7-211ENST00000589726 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
ATF7-211ENST00000589726 UNC13AQ9UPW8 1703 aa26.83■■□□□ 1.89
ATF7-211ENST00000589726 SCRIBQ14160 1630 aa26.69■■□□□ 1.86
ATF7-211ENST00000589726 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
ATF7-211ENST00000589726 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
ATF7-211ENST00000589726 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
ATF7-211ENST00000589726 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
ATF7-211ENST00000589726 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
ATF7-211ENST00000589726 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
ATF7-211ENST00000589726 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
ATF7-211ENST00000589726 CC2D2AQ9P2K1 1620 aa25.5■■□□□ 1.67
ATF7-211ENST00000589726 MROH2BQ7Z745 1585 aa25.47■■□□□ 1.67
ATF7-211ENST00000589726 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
ATF7-211ENST00000589726 WIZO95785 1651 aa25.25■■□□□ 1.63
ATF7-211ENST00000589726 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
ATF7-211ENST00000589726 RSF1Q96T23 1441 aaPredicted RBP25.21■■□□□ 1.63
ATF7-211ENST00000589726 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
ATF7-211ENST00000589726 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
ATF7-211ENST00000589726 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
ATF7-211ENST00000589726 HMGXB3Q12766 1538 aa25.05■■□□□ 1.6
ATF7-211ENST00000589726 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
ATF7-211ENST00000589726 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
ATF7-211ENST00000589726 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
ATF7-211ENST00000589726 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.53
ATF7-211ENST00000589726 NESP48681 1621 aa24.56■■□□□ 1.52
ATF7-211ENST00000589726 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
ATF7-211ENST00000589726 CFTRP13569 1480 aa24.32■■□□□ 1.48
ATF7-211ENST00000589726 KIF21AQ7Z4S6 1674 aa24.32■■□□□ 1.48
ATF7-211ENST00000589726 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
ATF7-211ENST00000589726 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
ATF7-211ENST00000589726 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.45
ATF7-211ENST00000589726 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
ATF7-211ENST00000589726 ERCC6Q03468 1493 aa24.06■■□□□ 1.44
ATF7-211ENST00000589726 PDS5BQ9NTI5 1447 aa24.04■■□□□ 1.44
ATF7-211ENST00000589726 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
ATF7-211ENST00000589726 URB2Q14146 1524 aaKnown RBP23.98■■□□□ 1.43
ATF7-211ENST00000589726 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
ATF7-211ENST00000589726 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
ATF7-211ENST00000589726 WDR62O43379 1518 aa23.92■■□□□ 1.42
ATF7-211ENST00000589726 CUX1P39880 1505 aa23.87■■□□□ 1.41
ATF7-211ENST00000589726 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
ATF7-211ENST00000589726 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
ATF7-211ENST00000589726 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
ATF7-211ENST00000589726 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
ATF7-211ENST00000589726 CUX2O14529 1486 aa23.71■■□□□ 1.39
ATF7-211ENST00000589726 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
ATF7-211ENST00000589726 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
ATF7-211ENST00000589726 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
ATF7-211ENST00000589726 FGD5Q6ZNL6 1462 aa23.66■■□□□ 1.38
ATF7-211ENST00000589726 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
ATF7-211ENST00000589726 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
ATF7-211ENST00000589726 RAD54L2Q9Y4B4 1467 aa23.59■■□□□ 1.37
ATF7-211ENST00000589726 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
ATF7-211ENST00000589726 IFT140Q96RY7 1462 aa23.47■■□□□ 1.35
ATF7-211ENST00000589726 EIF4G3O43432 1585 aaKnown RBP23.46■■□□□ 1.35
ATF7-211ENST00000589726 SOGA1O94964 1423 aa23.42■■□□□ 1.34
ATF7-211ENST00000589726 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
ATF7-211ENST00000589726 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.34
ATF7-211ENST00000589726 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
ATF7-211ENST00000589726 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.33
ATF7-211ENST00000589726 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
ATF7-211ENST00000589726 TDRD9Q8NDG6 1382 aaKnown RBP23.32■■□□□ 1.32
ATF7-211ENST00000589726 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
ATF7-211ENST00000589726 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
ATF7-211ENST00000589726 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
ATF7-211ENST00000589726 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
ATF7-211ENST00000589726 ADAMTS12P58397 1594 aa23.14■■□□□ 1.29
ATF7-211ENST00000589726 CHD1O14646 1710 aa23.13■■□□□ 1.29
ATF7-211ENST00000589726 GRIN2BQ13224 1484 aa23.12■■□□□ 1.29
ATF7-211ENST00000589726 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
ATF7-211ENST00000589726 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
ATF7-211ENST00000589726 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
ATF7-211ENST00000589726 IGF1RP08069 1367 aa23.01■■□□□ 1.27
ATF7-211ENST00000589726 CUL7Q14999 1698 aa22.98■■□□□ 1.27
ATF7-211ENST00000589726 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
ATF7-211ENST00000589726 CEP170Q5SW79 1584 aa22.91■■□□□ 1.26
ATF7-211ENST00000589726 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
ATF7-211ENST00000589726 GRIN2AQ12879 1464 aa22.9■■□□□ 1.26
ATF7-211ENST00000589726 PRXQ9BXM0 1461 aa22.87■■□□□ 1.25
ATF7-211ENST00000589726 FAM9AQ8IZU1 332 aaPredicted RBP22.87■■□□□ 1.25
ATF7-211ENST00000589726 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
ATF7-211ENST00000589726 CARMIL1Q5VZK9 1371 aa22.83■■□□□ 1.25
ATF7-211ENST00000589726 EEA1Q15075 1411 aa22.82■■□□□ 1.24
ATF7-211ENST00000589726 NUP160Q12769 1436 aa22.8■■□□□ 1.24
ATF7-211ENST00000589726 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
ATF7-211ENST00000589726 KIF21BO75037 1637 aa22.79■■□□□ 1.24
ATF7-211ENST00000589726 FBLN2P98095 1184 aa22.77■■□□□ 1.24
ATF7-211ENST00000589726 CSRNP3Q8WYN3 585 aa22.74■■□□□ 1.23
ATF7-211ENST00000589726 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
ATF7-211ENST00000589726 CTTNBP2Q8WZ74 1663 aa22.71■■□□□ 1.23
ATF7-211ENST00000589726 SHROOM2Q13796 1616 aa22.68■■□□□ 1.22
ATF7-211ENST00000589726 ERCC6L2Q5T890 1561 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms