RNA–Protein interactions for RNA: ENST00000559776.1

RPS17-204, Transcript of ribosomal protein S17, humanhuman

TSL 2

Gene RPS17, Length 760 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS17-204ENST00000559776 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
RPS17-204ENST00000559776 CCDC180Q9P1Z9 1646 aa31.26■■■□□ 2.59
RPS17-204ENST00000559776 ABCC9O60706 1549 aa30.42■■■□□ 2.46
RPS17-204ENST00000559776 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
RPS17-204ENST00000559776 NACADO15069 1562 aa29.35■■■□□ 2.29
RPS17-204ENST00000559776 MYO15BQ96JP2 1530 aa29.18■■■□□ 2.26
RPS17-204ENST00000559776 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
RPS17-204ENST00000559776 DCAF8L2P0C7V8 631 aa29.13■■■□□ 2.25
RPS17-204ENST00000559776 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
RPS17-204ENST00000559776 UNC13AQ9UPW8 1703 aa28.75■■■□□ 2.19
RPS17-204ENST00000559776 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
RPS17-204ENST00000559776 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
RPS17-204ENST00000559776 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
RPS17-204ENST00000559776 SHROOM4Q9ULL8 1493 aa28.25■■■□□ 2.11
RPS17-204ENST00000559776 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
RPS17-204ENST00000559776 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.03
RPS17-204ENST00000559776 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
RPS17-204ENST00000559776 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
RPS17-204ENST00000559776 SMARCA4P51532 1647 aa27.2■■□□□ 1.95
RPS17-204ENST00000559776 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
RPS17-204ENST00000559776 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
RPS17-204ENST00000559776 NCAPD3P42695 1498 aa27.02■■□□□ 1.92
RPS17-204ENST00000559776 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
RPS17-204ENST00000559776 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
RPS17-204ENST00000559776 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
RPS17-204ENST00000559776 MROH2BQ7Z745 1585 aa26.93■■□□□ 1.9
RPS17-204ENST00000559776 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
RPS17-204ENST00000559776 WIZO95785 1651 aa26.68■■□□□ 1.86
RPS17-204ENST00000559776 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
RPS17-204ENST00000559776 TOP2AP11388 1531 aaKnown RBP26.43■■□□□ 1.82
RPS17-204ENST00000559776 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
RPS17-204ENST00000559776 NESP48681 1621 aa26.31■■□□□ 1.8
RPS17-204ENST00000559776 ERCC6Q03468 1493 aa26.28■■□□□ 1.8
RPS17-204ENST00000559776 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.79
RPS17-204ENST00000559776 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
RPS17-204ENST00000559776 KIF21AQ7Z4S6 1674 aa26.11■■□□□ 1.77
RPS17-204ENST00000559776 CFTRP13569 1480 aa26.06■■□□□ 1.76
RPS17-204ENST00000559776 CUX2O14529 1486 aa26.05■■□□□ 1.76
RPS17-204ENST00000559776 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
RPS17-204ENST00000559776 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
RPS17-204ENST00000559776 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
RPS17-204ENST00000559776 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
RPS17-204ENST00000559776 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
RPS17-204ENST00000559776 MRC2Q9UBG0 1479 aa25.88■■□□□ 1.73
RPS17-204ENST00000559776 SUPT5HO00267 1087 aaKnown RBP25.84■■□□□ 1.73
RPS17-204ENST00000559776 WDR62O43379 1518 aa25.82■■□□□ 1.72
RPS17-204ENST00000559776 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
RPS17-204ENST00000559776 ABCC8Q09428 1581 aa25.58■■□□□ 1.69
RPS17-204ENST00000559776 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
RPS17-204ENST00000559776 TOPBP1Q92547 1522 aa25.51■■□□□ 1.67
RPS17-204ENST00000559776 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
RPS17-204ENST00000559776 CUX1P39880 1505 aa25.28■■□□□ 1.64
RPS17-204ENST00000559776 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
RPS17-204ENST00000559776 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
RPS17-204ENST00000559776 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
RPS17-204ENST00000559776 DNAJC5Q9H3Z4 198 aa25.19■■□□□ 1.62
RPS17-204ENST00000559776 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
RPS17-204ENST00000559776 EIF4G3O43432 1585 aaKnown RBP25.18■■□□□ 1.62
RPS17-204ENST00000559776 SOGA1O94964 1423 aa25.16■■□□□ 1.62
RPS17-204ENST00000559776 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
RPS17-204ENST00000559776 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
RPS17-204ENST00000559776 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
RPS17-204ENST00000559776 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
RPS17-204ENST00000559776 RAD54L2Q9Y4B4 1467 aa25.12■■□□□ 1.61
RPS17-204ENST00000559776 SYNJ1O43426 1573 aa25.06■■□□□ 1.6
RPS17-204ENST00000559776 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.62e-9■■■□□ 16.3
RPS17-204ENST00000559776 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
RPS17-204ENST00000559776 TDRD9Q8NDG6 1382 aaKnown RBP24.97■■□□□ 1.59
RPS17-204ENST00000559776 PBRM1Q86U86 1689 aa24.93■■□□□ 1.58
RPS17-204ENST00000559776 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
RPS17-204ENST00000559776 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
RPS17-204ENST00000559776 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.58
RPS17-204ENST00000559776 CHD1O14646 1710 aa24.89■■□□□ 1.58
RPS17-204ENST00000559776 OSCARQ8IYS5 282 aa24.89■■□□□ 1.58
RPS17-204ENST00000559776 MAGI1Q96QZ7 1491 aaPredicted RBP24.87■■□□□ 1.57
RPS17-204ENST00000559776 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
RPS17-204ENST00000559776 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
RPS17-204ENST00000559776 ERICH3Q5RHP9 1530 aa24.72■■□□□ 1.55
RPS17-204ENST00000559776 FBLN2P98095 1184 aa24.72■■□□□ 1.55
RPS17-204ENST00000559776 ADAMTS12P58397 1594 aa24.69■■□□□ 1.54
RPS17-204ENST00000559776 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
RPS17-204ENST00000559776 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
RPS17-204ENST00000559776 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
RPS17-204ENST00000559776 GRIN2AQ12879 1464 aa24.58■■□□□ 1.53
RPS17-204ENST00000559776 CLASP1Q7Z460 1538 aa24.58■■□□□ 1.53
RPS17-204ENST00000559776 RIMBP3CA6NJZ7 1639 aa24.56■■□□□ 1.52
RPS17-204ENST00000559776 RIMBP3BA6NNM3 1639 aa24.56■■□□□ 1.52
RPS17-204ENST00000559776 RIMBP3Q9UFD9 1639 aa24.56■■□□□ 1.52
RPS17-204ENST00000559776 CUL7Q14999 1698 aa24.54■■□□□ 1.52
RPS17-204ENST00000559776 ARHGEF11O15085 1522 aa24.52■■□□□ 1.52
RPS17-204ENST00000559776 NUP160Q12769 1436 aa24.47■■□□□ 1.51
RPS17-204ENST00000559776 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
RPS17-204ENST00000559776 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
RPS17-204ENST00000559776 IGF1RP08069 1367 aa24.45■■□□□ 1.5
RPS17-204ENST00000559776 CARMIL1Q5VZK9 1371 aa24.34■■□□□ 1.49
RPS17-204ENST00000559776 SHROOM2Q13796 1616 aa24.34■■□□□ 1.49
RPS17-204ENST00000559776 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
RPS17-204ENST00000559776 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
RPS17-204ENST00000559776 KIAA0586Q9BVV6 1533 aa24.24■■□□□ 1.47
RPS17-204ENST00000559776 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms