RNA–Protein interactions for RNA: ENST00000556555.1

NDUFB1-205, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 3

Gene NDUFB1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-205ENST00000556555 NISCHQ9Y2I1 1504 aa53.42■■■■■ 6.14
NDUFB1-205ENST00000556555 CCDC180Q9P1Z9 1646 aa47.52■■■■■ 5.2
NDUFB1-205ENST00000556555 ABCC9O60706 1549 aa46.33■■■■■ 5.01
NDUFB1-205ENST00000556555 RB1CC1Q8TDY2 1594 aa44.71■■■■■ 4.75
NDUFB1-205ENST00000556555 NACADO15069 1562 aa44.69■■■■■ 4.75
NDUFB1-205ENST00000556555 ZCCHC6Q5VYS8 1495 aaKnown RBP44.52■■■■■ 4.72
NDUFB1-205ENST00000556555 MYO15BQ96JP2 1530 aa44.51■■■■■ 4.72
NDUFB1-205ENST00000556555 DCAF8L2P0C7V8 631 aa44.5■■■■■ 4.71
NDUFB1-205ENST00000556555 DCAF1Q9Y4B6 1507 aa44.3■■■■■ 4.68
NDUFB1-205ENST00000556555 UNC13AQ9UPW8 1703 aa43.55■■■■■ 4.56
NDUFB1-205ENST00000556555 PABPN1Q86U42 306 aaKnown RBP eCLIP43.27■■■■■ 4.52
NDUFB1-205ENST00000556555 BICRAQ9NZM4 1560 aa43.26■■■■■ 4.52
NDUFB1-205ENST00000556555 SCRIBQ14160 1630 aa43.24■■■■■ 4.51
NDUFB1-205ENST00000556555 SHROOM4Q9ULL8 1493 aa43.04■■■■■ 4.48
NDUFB1-205ENST00000556555 DNAJC5BQ9UF47 199 aa42.43■■■■■ 4.38
NDUFB1-205ENST00000556555 EIF4G1Q04637 1599 aaKnown RBP42.16■■■■■ 4.34
NDUFB1-205ENST00000556555 CC2D2AQ9P2K1 1620 aa41.95■■■■■ 4.31
NDUFB1-205ENST00000556555 CECR2Q9BXF3 1484 aa41.7■■■■■ 4.27
NDUFB1-205ENST00000556555 BAZ1AQ9NRL2 1556 aaPredicted RBP41.44■■■■■ 4.22
NDUFB1-205ENST00000556555 SMARCA4P51532 1647 aa41.42■■■■■ 4.22
NDUFB1-205ENST00000556555 NCAPD3P42695 1498 aa41.22■■■■■ 4.19
NDUFB1-205ENST00000556555 SMARCA2P51531 1590 aa41.22■■■■■ 4.19
NDUFB1-205ENST00000556555 ATAD2BQ9ULI0 1458 aa41.21■■■■■ 4.19
NDUFB1-205ENST00000556555 MROH2BQ7Z745 1585 aa41.11■■■■■ 4.17
NDUFB1-205ENST00000556555 PEG3Q9GZU2 1588 aa41.09■■■■■ 4.17
NDUFB1-205ENST00000556555 HMGXB3Q12766 1538 aa41.04■■■■■ 4.16
NDUFB1-205ENST00000556555 BAZ1BQ9UIG0 1483 aaKnown RBP40.89■■■■■ 4.14
NDUFB1-205ENST00000556555 RSF1Q96T23 1441 aaPredicted RBP40.69■■■■■ 4.1
NDUFB1-205ENST00000556555 WIZO95785 1651 aa40.62■■■■■ 4.09
NDUFB1-205ENST00000556555 TOP2AP11388 1531 aaKnown RBP40.31■■■■■ 4.04
NDUFB1-205ENST00000556555 LAMC3Q9Y6N6 1575 aa40.13■■■■■ 4.01
NDUFB1-205ENST00000556555 NESP48681 1621 aa40.08■■■■■ 4.01
NDUFB1-205ENST00000556555 ERCC6Q03468 1493 aa40.01■■■■■ 4
NDUFB1-205ENST00000556555 CADPSQ9ULU8 1353 aa40.01■■■■■ 4
NDUFB1-205ENST00000556555 PDS5BQ9NTI5 1447 aa39.88■■■■□ 3.97
NDUFB1-205ENST00000556555 CCDC88BA6NC98 1476 aa39.78■■■■□ 3.96
NDUFB1-205ENST00000556555 CFTRP13569 1480 aa39.78■■■■□ 3.96
NDUFB1-205ENST00000556555 CUX2O14529 1486 aa39.64■■■■□ 3.94
NDUFB1-205ENST00000556555 KIF21AQ7Z4S6 1674 aa39.62■■■■□ 3.93
NDUFB1-205ENST00000556555 SUPT5HO00267 1087 aaKnown RBP39.6■■■■□ 3.93
NDUFB1-205ENST00000556555 THOC2Q8NI27 1593 aaKnown RBP39.54■■■■□ 3.92
NDUFB1-205ENST00000556555 FANCD2Q9BXW9 1451 aa39.52■■■■□ 3.92
NDUFB1-205ENST00000556555 CEP164Q9UPV0 1460 aa39.49■■■■□ 3.91
NDUFB1-205ENST00000556555 PRDM2Q13029 1718 aa39.44■■■■□ 3.9
NDUFB1-205ENST00000556555 MRC2Q9UBG0 1479 aa39.43■■■■□ 3.9
NDUFB1-205ENST00000556555 WDR62O43379 1518 aa39.3■■■■□ 3.88
NDUFB1-205ENST00000556555 URB2Q14146 1524 aaKnown RBP39.09■■■■□ 3.85
NDUFB1-205ENST00000556555 ABCC8Q09428 1581 aa39■■■■□ 3.83
NDUFB1-205ENST00000556555 TOPBP1Q92547 1522 aa38.89■■■■□ 3.82
NDUFB1-205ENST00000556555 DNMBPQ6XZF7 1577 aa38.87■■■■□ 3.81
NDUFB1-205ENST00000556555 IFT140Q96RY7 1462 aa38.69■■■■□ 3.78
NDUFB1-205ENST00000556555 CUX1P39880 1505 aa38.58■■■■□ 3.77
NDUFB1-205ENST00000556555 POLA1P09884 1462 aaPredicted RBP38.56■■■■□ 3.76
NDUFB1-205ENST00000556555 FGD5Q6ZNL6 1462 aa38.46■■■■□ 3.75
NDUFB1-205ENST00000556555 TARBP1Q13395 1621 aaKnown RBP38.45■■■■□ 3.75
NDUFB1-205ENST00000556555 SOGA1O94964 1423 aa38.4■■■■□ 3.74
NDUFB1-205ENST00000556555 ZNF608Q9ULD9 1512 aaPredicted RBP38.4■■■■□ 3.74
NDUFB1-205ENST00000556555 WRNQ14191 1432 aaPredicted RBP eCLIP38.39■■■■□ 3.74
NDUFB1-205ENST00000556555 RAD54L2Q9Y4B4 1467 aa38.33■■■■□ 3.73
NDUFB1-205ENST00000556555 DNAJC5Q9H3Z4 198 aa38.32■■■■□ 3.72
NDUFB1-205ENST00000556555 TOP2BQ02880 1626 aa38.3■■■■□ 3.72
NDUFB1-205ENST00000556555 EIF4G3O43432 1585 aaKnown RBP38.29■■■■□ 3.72
NDUFB1-205ENST00000556555 WDR97A6NE52 1622 aa38.28■■■■□ 3.72
NDUFB1-205ENST00000556555 BIVM-ERCC5R4GMW8 1640 aa38.28■■■■□ 3.72
NDUFB1-205ENST00000556555 SYNJ1O43426 1573 aa38.23■■■■□ 3.71
NDUFB1-205ENST00000556555 AQRO60306 1485 aaKnown RBP eCLIP38.19■■■■□ 3.7
NDUFB1-205ENST00000556555 ABCA10Q8WWZ4 1543 aa38.14■■■■□ 3.7
NDUFB1-205ENST00000556555 TDRD9Q8NDG6 1382 aaKnown RBP38.14■■■■□ 3.7
NDUFB1-205ENST00000556555 GRIN2BQ13224 1484 aa37.99■■■■□ 3.67
NDUFB1-205ENST00000556555 GAPVD1Q14C86 1478 aa37.97■■■■□ 3.67
NDUFB1-205ENST00000556555 OSCARQ8IYS5 282 aa37.97■■■■□ 3.67
NDUFB1-205ENST00000556555 ABCA5Q8WWZ7 1642 aa37.95■■■■□ 3.67
NDUFB1-205ENST00000556555 MAGI1Q96QZ7 1491 aaPredicted RBP37.91■■■■□ 3.66
NDUFB1-205ENST00000556555 SNAPC4Q5SXM2 1469 aa37.88■■■■□ 3.65
NDUFB1-205ENST00000556555 PBRM1Q86U86 1689 aa37.83■■■■□ 3.65
NDUFB1-205ENST00000556555 CHD1O14646 1710 aa37.75■■■■□ 3.63
NDUFB1-205ENST00000556555 SYNJ2O15056 1496 aa37.74■■■■□ 3.63
NDUFB1-205ENST00000556555 FBLN2P98095 1184 aa37.73■■■■□ 3.63
NDUFB1-205ENST00000556555 ERICH3Q5RHP9 1530 aa37.71■■■■□ 3.63
NDUFB1-205ENST00000556555 CHMP7Q8WUX9 453 aaPredicted RBP37.7■■■■□ 3.63
NDUFB1-205ENST00000556555 KIF27Q86VH2 1401 aa37.62■■■■□ 3.61
NDUFB1-205ENST00000556555 ADAMTS12P58397 1594 aa37.59■■■■□ 3.61
NDUFB1-205ENST00000556555 FHAD1B1AJZ9 1412 aa37.57■■■■□ 3.6
NDUFB1-205ENST00000556555 GRIN2AQ12879 1464 aa37.48■■■■□ 3.59
NDUFB1-205ENST00000556555 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
NDUFB1-205ENST00000556555 IGF1RP08069 1367 aa37.42■■■■□ 3.58
NDUFB1-205ENST00000556555 CLASP1Q7Z460 1538 aa37.41■■■■□ 3.58
NDUFB1-205ENST00000556555 CUL7Q14999 1698 aa37.36■■■■□ 3.57
NDUFB1-205ENST00000556555 NUP160Q12769 1436 aa37.33■■■■□ 3.57
NDUFB1-205ENST00000556555 ARHGEF11O15085 1522 aa37.31■■■■□ 3.56
NDUFB1-205ENST00000556555 RIMBP3CA6NJZ7 1639 aa37.28■■■■□ 3.56
NDUFB1-205ENST00000556555 RIMBP3BA6NNM3 1639 aa37.28■■■■□ 3.56
NDUFB1-205ENST00000556555 RIMBP3Q9UFD9 1639 aa37.28■■■■□ 3.56
NDUFB1-205ENST00000556555 CEP170Q5SW79 1584 aa37.23■■■■□ 3.55
NDUFB1-205ENST00000556555 CARMIL1Q5VZK9 1371 aa37.2■■■■□ 3.55
NDUFB1-205ENST00000556555 RUSC2Q8N2Y8 1516 aa37.12■■■■□ 3.53
NDUFB1-205ENST00000556555 SHROOM2Q13796 1616 aa37.02■■■■□ 3.52
NDUFB1-205ENST00000556555 CHIC1Q5VXU3 224 aa37.01■■■■□ 3.52
NDUFB1-205ENST00000556555 RAPGEF2Q9Y4G8 1499 aa37.01■■■■□ 3.51
NDUFB1-205ENST00000556555 ARAP1Q96P48 1450 aa37■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms