Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.11■□□□□ 0.17
SOX11P35716 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.11■□□□□ 0.17
SOX11P35716 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.11■□□□□ 0.17
SOX11P35716 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.11■□□□□ 0.17
SOX11P35716 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX11P35716 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.11■□□□□ 0.17
SOX11P35716 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.11■□□□□ 0.17
SOX11P35716 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SOX11P35716 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.11■□□□□ 0.17
SOX11P35716 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SOX11P35716 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX11P35716 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX11P35716 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SOX11P35716 AC105917.1-201ENST00000506637 2539 ntBASIC16.11■□□□□ 0.17
SOX11P35716 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX11P35716 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX11P35716 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SOX11P35716 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX11P35716 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX11P35716 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.11■□□□□ 0.17
SOX11P35716 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX11P35716 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SOX11P35716 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SOX11P35716 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.1■□□□□ 0.17
SOX11P35716 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.1■□□□□ 0.17
SOX11P35716 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.1■□□□□ 0.17
SOX11P35716 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.1■□□□□ 0.17
SOX11P35716 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.1■□□□□ 0.17
SOX11P35716 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.1■□□□□ 0.17
SOX11P35716 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.1■□□□□ 0.17
SOX11P35716 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.1■□□□□ 0.17
SOX11P35716 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.1■□□□□ 0.17
SOX11P35716 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.1■□□□□ 0.17
SOX11P35716 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.1■□□□□ 0.17
SOX11P35716 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.1■□□□□ 0.17
SOX11P35716 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SOX11P35716 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SOX11P35716 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SOX11P35716 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.1■□□□□ 0.17
SOX11P35716 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.1■□□□□ 0.17
SOX11P35716 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SOX11P35716 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.1■□□□□ 0.17
SOX11P35716 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX11P35716 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SOX11P35716 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.09■□□□□ 0.17
SOX11P35716 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SOX11P35716 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SOX11P35716 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SOX11P35716 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SOX11P35716 YBX2P1-201ENST00000394192 760 ntBASIC16.09■□□□□ 0.17
SOX11P35716 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SOX11P35716 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.09■□□□□ 0.17
SOX11P35716 AC064836.3-201ENST00000607928 673 ntBASIC16.09■□□□□ 0.17
SOX11P35716 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.09■□□□□ 0.17
SOX11P35716 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SOX11P35716 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
SOX11P35716 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX11P35716 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX11P35716 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX11P35716 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX11P35716 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SOX11P35716 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms