RNA–Protein interactions for RNA: ENST00000349112.7

PDE9A-205, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-205ENST00000349112 NISCHQ9Y2I1 1504 aa42.08■■■■■ 4.33
PDE9A-205ENST00000349112 CCDC180Q9P1Z9 1646 aa37.57■■■■□ 3.61
PDE9A-205ENST00000349112 ABCC9O60706 1549 aa37.23■■■■□ 3.55
PDE9A-205ENST00000349112 RB1CC1Q8TDY2 1594 aa35.56■■■■□ 3.28
PDE9A-205ENST00000349112 DCAF8L2P0C7V8 631 aa35.46■■■■□ 3.27
PDE9A-205ENST00000349112 NACADO15069 1562 aa35.38■■■■□ 3.25
PDE9A-205ENST00000349112 ZCCHC6Q5VYS8 1495 aaKnown RBP34.98■■■■□ 3.19
PDE9A-205ENST00000349112 MYO15BQ96JP2 1530 aa34.94■■■■□ 3.18
PDE9A-205ENST00000349112 UNC13AQ9UPW8 1703 aa34.84■■■■□ 3.17
PDE9A-205ENST00000349112 PABPN1Q86U42 306 aaKnown RBP eCLIP34.72■■■■□ 3.15
PDE9A-205ENST00000349112 DCAF1Q9Y4B6 1507 aa34.7■■■■□ 3.14
PDE9A-205ENST00000349112 BICRAQ9NZM4 1560 aa34.5■■■■□ 3.11
PDE9A-205ENST00000349112 DNAJC5BQ9UF47 199 aa34.43■■■■□ 3.1
PDE9A-205ENST00000349112 SCRIBQ14160 1630 aa34.39■■■■□ 3.1
PDE9A-205ENST00000349112 SHROOM4Q9ULL8 1493 aa33.97■■■■□ 3.03
PDE9A-205ENST00000349112 EIF4G1Q04637 1599 aaKnown RBP33.64■■■□□ 2.98
PDE9A-205ENST00000349112 CC2D2AQ9P2K1 1620 aa33.62■■■□□ 2.97
PDE9A-205ENST00000349112 CECR2Q9BXF3 1484 aa33.44■■■□□ 2.94
PDE9A-205ENST00000349112 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
PDE9A-205ENST00000349112 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
PDE9A-205ENST00000349112 ATAD2BQ9ULI0 1458 aa32.64■■■□□ 2.82
PDE9A-205ENST00000349112 NCAPD3P42695 1498 aa32.62■■■□□ 2.81
PDE9A-205ENST00000349112 SMARCA2P51531 1590 aa32.58■■■□□ 2.81
PDE9A-205ENST00000349112 HMGXB3Q12766 1538 aa32.47■■■□□ 2.79
PDE9A-205ENST00000349112 MROH2BQ7Z745 1585 aa32.47■■■□□ 2.79
PDE9A-205ENST00000349112 BAZ1BQ9UIG0 1483 aaKnown RBP32.41■■■□□ 2.78
PDE9A-205ENST00000349112 PEG3Q9GZU2 1588 aa32.36■■■□□ 2.77
PDE9A-205ENST00000349112 WIZO95785 1651 aa32.16■■■□□ 2.74
PDE9A-205ENST00000349112 ERCC6Q03468 1493 aa32.11■■■□□ 2.73
PDE9A-205ENST00000349112 NESP48681 1621 aa32.1■■■□□ 2.73
PDE9A-205ENST00000349112 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
PDE9A-205ENST00000349112 LAMC3Q9Y6N6 1575 aa31.87■■■□□ 2.69
PDE9A-205ENST00000349112 CUX2O14529 1486 aa31.79■■■□□ 2.68
PDE9A-205ENST00000349112 KIF21AQ7Z4S6 1674 aa31.74■■■□□ 2.67
PDE9A-205ENST00000349112 TOP2AP11388 1531 aaKnown RBP31.72■■■□□ 2.67
PDE9A-205ENST00000349112 CADPSQ9ULU8 1353 aa31.68■■■□□ 2.66
PDE9A-205ENST00000349112 THOC2Q8NI27 1593 aaKnown RBP31.66■■■□□ 2.66
PDE9A-205ENST00000349112 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
PDE9A-205ENST00000349112 CFTRP13569 1480 aa31.42■■■□□ 2.62
PDE9A-205ENST00000349112 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
PDE9A-205ENST00000349112 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
PDE9A-205ENST00000349112 FANCD2Q9BXW9 1451 aa31.38■■■□□ 2.61
PDE9A-205ENST00000349112 CCDC88BA6NC98 1476 aa31.35■■■□□ 2.61
PDE9A-205ENST00000349112 WDR62O43379 1518 aa31.29■■■□□ 2.6
PDE9A-205ENST00000349112 PRDM2Q13029 1718 aa31.25■■■□□ 2.59
PDE9A-205ENST00000349112 DNAJC5Q9H3Z4 198 aa31.22■■■□□ 2.59
PDE9A-205ENST00000349112 URB2Q14146 1524 aaKnown RBP31.1■■■□□ 2.57
PDE9A-205ENST00000349112 SUPT5HO00267 1087 aaKnown RBP30.98■■■□□ 2.55
PDE9A-205ENST00000349112 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
PDE9A-205ENST00000349112 DNMBPQ6XZF7 1577 aa30.77■■■□□ 2.52
PDE9A-205ENST00000349112 ABCC8Q09428 1581 aa30.72■■■□□ 2.51
PDE9A-205ENST00000349112 IFT140Q96RY7 1462 aa30.7■■■□□ 2.5
PDE9A-205ENST00000349112 ZNF608Q9ULD9 1512 aaPredicted RBP30.66■■■□□ 2.5
PDE9A-205ENST00000349112 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
PDE9A-205ENST00000349112 EIF4G3O43432 1585 aaKnown RBP30.55■■■□□ 2.48
PDE9A-205ENST00000349112 TARBP1Q13395 1621 aaKnown RBP30.52■■■□□ 2.48
PDE9A-205ENST00000349112 CUX1P39880 1505 aa30.48■■■□□ 2.47
PDE9A-205ENST00000349112 RAD54L2Q9Y4B4 1467 aa30.47■■■□□ 2.47
PDE9A-205ENST00000349112 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.47
PDE9A-205ENST00000349112 AQRO60306 1485 aaKnown RBP eCLIP30.43■■■□□ 2.46
PDE9A-205ENST00000349112 OSCARQ8IYS5 282 aa30.41■■■□□ 2.46
PDE9A-205ENST00000349112 SOGA1O94964 1423 aa30.4■■■□□ 2.46
PDE9A-205ENST00000349112 TDRD9Q8NDG6 1382 aaKnown RBP30.32■■■□□ 2.44
PDE9A-205ENST00000349112 CHD1O14646 1710 aa30.26■■■□□ 2.43
PDE9A-205ENST00000349112 TRIM41Q8WV44 630 aa30.23■■■□□ 2.43
PDE9A-205ENST00000349112 WDR97A6NE52 1622 aa30.21■■■□□ 2.43
PDE9A-205ENST00000349112 FBLN2P98095 1184 aa30.21■■■□□ 2.43
PDE9A-205ENST00000349112 SNAPC4Q5SXM2 1469 aa30.16■■■□□ 2.42
PDE9A-205ENST00000349112 SYNJ1O43426 1573 aa30.14■■■□□ 2.42
PDE9A-205ENST00000349112 WRNQ14191 1432 aaPredicted RBP eCLIP30.14■■■□□ 2.42
PDE9A-205ENST00000349112 BIVM-ERCC5R4GMW8 1640 aa30.12■■■□□ 2.41
PDE9A-205ENST00000349112 TOP2BQ02880 1626 aa30.1■■■□□ 2.41
PDE9A-205ENST00000349112 PBRM1Q86U86 1689 aa30.1■■■□□ 2.41
PDE9A-205ENST00000349112 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
PDE9A-205ENST00000349112 ABCA10Q8WWZ4 1543 aa30.07■■■□□ 2.4
PDE9A-205ENST00000349112 RIMBP3CA6NJZ7 1639 aa30.06■■■□□ 2.4
PDE9A-205ENST00000349112 RIMBP3BA6NNM3 1639 aa30.06■■■□□ 2.4
PDE9A-205ENST00000349112 RIMBP3Q9UFD9 1639 aa30.06■■■□□ 2.4
PDE9A-205ENST00000349112 GAPVD1Q14C86 1478 aa30.06■■■□□ 2.4
PDE9A-205ENST00000349112 MAGI1Q96QZ7 1491 aaPredicted RBP30.03■■■□□ 2.4
PDE9A-205ENST00000349112 ABCA5Q8WWZ7 1642 aa30.03■■■□□ 2.4
PDE9A-205ENST00000349112 CHMP7Q8WUX9 453 aaPredicted RBP29.99■■■□□ 2.39
PDE9A-205ENST00000349112 ARHGEF11O15085 1522 aa29.99■■■□□ 2.39
PDE9A-205ENST00000349112 SYNJ2O15056 1496 aa29.94■■■□□ 2.38
PDE9A-205ENST00000349112 CLASP1Q7Z460 1538 aa29.83■■■□□ 2.37
PDE9A-205ENST00000349112 ADAMTS12P58397 1594 aa29.8■■■□□ 2.36
PDE9A-205ENST00000349112 CYB5RLQ6IPT4 315 aa29.74■■■□□ 2.35
PDE9A-205ENST00000349112 ARAP1Q96P48 1450 aa29.73■■■□□ 2.35
PDE9A-205ENST00000349112 GRIN2AQ12879 1464 aa29.72■■■□□ 2.35
PDE9A-205ENST00000349112 ERICH3Q5RHP9 1530 aa29.7■■■□□ 2.35
PDE9A-205ENST00000349112 FHAD1B1AJZ9 1412 aa29.67■■■□□ 2.34
PDE9A-205ENST00000349112 CEP170Q5SW79 1584 aa29.62■■■□□ 2.33
PDE9A-205ENST00000349112 NUP160Q12769 1436 aa29.56■■■□□ 2.32
PDE9A-205ENST00000349112 KIF27Q86VH2 1401 aa29.51■■■□□ 2.32
PDE9A-205ENST00000349112 ERCC6L2Q5T890 1561 aa29.47■■■□□ 2.31
PDE9A-205ENST00000349112 CUL7Q14999 1698 aa29.41■■■□□ 2.3
PDE9A-205ENST00000349112 IGF1RP08069 1367 aa29.41■■■□□ 2.3
PDE9A-205ENST00000349112 SHROOM2Q13796 1616 aa29.4■■■□□ 2.3
PDE9A-205ENST00000349112 RUSC2Q8N2Y8 1516 aa29.37■■■□□ 2.29
PDE9A-205ENST00000349112 TRHP20396 242 aaPredicted RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms