Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 PTCHD3P3-201ENST00000403073 906 ntBASIC15.81■□□□□ 0.12
CAPN3P20807 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN3P20807 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN3P20807 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.81■□□□□ 0.12
CAPN3P20807 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 AC107918.2-201ENST00000530817 355 ntBASIC15.81■□□□□ 0.12
CAPN3P20807 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.81■□□□□ 0.12
CAPN3P20807 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 AC055717.3-201ENST00000622967 595 ntBASIC15.81■□□□□ 0.12
CAPN3P20807 FAM215A-202ENST00000632077 792 ntBASIC15.81■□□□□ 0.12
CAPN3P20807 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPN3P20807 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN3P20807 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN3P20807 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN3P20807 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 MST1L-201ENST00000442552 2185 ntBASIC15.8■□□□□ 0.12
CAPN3P20807 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CAPN3P20807 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 AC068418.2-201ENST00000577309 3703 ntBASIC15.8■□□□□ 0.12
CAPN3P20807 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 AC022532.1-201ENST00000624563 1728 ntBASIC15.8■□□□□ 0.12
CAPN3P20807 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN3P20807 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN3P20807 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CAPN3P20807 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN3P20807 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CAPN3P20807 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPN3P20807 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 RPSAP43-201ENST00000402237 625 ntBASIC15.8■□□□□ 0.12
CAPN3P20807 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPN3P20807 RBM17P3-201ENST00000417687 1192 ntBASIC15.8■□□□□ 0.12
CAPN3P20807 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN3P20807 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPN3P20807 AC116407.3-201ENST00000623905 1129 ntBASIC15.8■□□□□ 0.12
CAPN3P20807 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN3P20807 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CAPN3P20807 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CAPN3P20807 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN3P20807 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CAPN3P20807 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN3P20807 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN3P20807 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
CAPN3P20807 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPN3P20807 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPN3P20807 PI4KAP1-204ENST00000612579 1703 ntBASIC15.8■□□□□ 0.12
CAPN3P20807 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.79■□□□□ 0.12
CAPN3P20807 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN3P20807 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CAPN3P20807 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CAPN3P20807 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms