RNA–Protein interactions for RNA: ENST00000537592.6

SALL3-202, Transcript of spalt like transcription factor 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SALL3, Length 6,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3-202ENST00000537592 DCAF8L2P0C7V8 631 aa29.76■■■□□ 2.36
SALL3-202ENST00000537592 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
SALL3-202ENST00000537592 SUPT5HO00267 1087 aaKnown RBP27.76■■■□□ 2.03
SALL3-202ENST00000537592 SHROOM4Q9ULL8 1493 aa27.31■■□□□ 1.96
SALL3-202ENST00000537592 EHMT2Q96KQ7 1210 aa26.93■■□□□ 1.9
SALL3-202ENST00000537592 FAM9AQ8IZU1 332 aaPredicted RBP26.75■■□□□ 1.87
SALL3-202ENST00000537592 APLP2Q06481 763 aa26.74■■□□□ 1.87
SALL3-202ENST00000537592 PELP1Q8IZL8 1130 aaKnown RBP26.17■■□□□ 1.78
SALL3-202ENST00000537592 TTBK1Q5TCY1 1321 aaPredicted RBP25.97■■□□□ 1.75
SALL3-202ENST00000537592 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
SALL3-202ENST00000537592 ATP1B4Q9UN42 357 aaPredicted RBP25.9■■□□□ 1.74
SALL3-202ENST00000537592 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
SALL3-202ENST00000537592 UBTFP17480 764 aaKnown RBP25.62■■□□□ 1.69
SALL3-202ENST00000537592 PCGF6Q9BYE7 350 aa25.57■■□□□ 1.68
SALL3-202ENST00000537592 CCER1Q8TC90 406 aaPredicted RBP25.34■■□□□ 1.65
SALL3-202ENST00000537592 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
SALL3-202ENST00000537592 MYT1LQ9UL68 1186 aa25.18■■□□□ 1.62
SALL3-202ENST00000537592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.11■■□□□ 1.61
SALL3-202ENST00000537592 HNRNPUL2Q1KMD3 747 aaKnown RBP25.11■■□□□ 1.61
SALL3-202ENST00000537592 CENPBP07199 599 aaPredicted RBP25.09■■□□□ 1.61
SALL3-202ENST00000537592 ERICH6Q7L0X2 663 aa25.01■■□□□ 1.59
SALL3-202ENST00000537592 NEFLP07196 543 aa24.83■■□□□ 1.57
SALL3-202ENST00000537592 PPARGC1BQ86YN6 1023 aaKnown RBP24.8■■□□□ 1.56
SALL3-202ENST00000537592 ITGAEP38570 1179 aa24.75■■□□□ 1.55
SALL3-202ENST00000537592 POLR3GLQ9BT43 218 aa24.63■■□□□ 1.53
SALL3-202ENST00000537592 ABCC9O60706 1549 aa24.61■■□□□ 1.53
SALL3-202ENST00000537592 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.52
SALL3-202ENST00000537592 YTHDC1Q96MU7 727 aaKnown RBP24.57■■□□□ 1.52
SALL3-202ENST00000537592 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
SALL3-202ENST00000537592 TRIM26Q12899 539 aaPredicted RBP24.5■■□□□ 1.51
SALL3-202ENST00000537592 SLC4A1APQ9BWU0 796 aaKnown RBP24.38■■□□□ 1.49
SALL3-202ENST00000537592 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
SALL3-202ENST00000537592 CNGB1Q14028 1251 aaPredicted RBP24.24■■□□□ 1.47
SALL3-202ENST00000537592 FBLN2P98095 1184 aa24.21■■□□□ 1.47
SALL3-202ENST00000537592 DAXXQ9UER7 740 aaPredicted RBP24.2■■□□□ 1.46
SALL3-202ENST00000537592 FAM50AQ14320 339 aaKnown RBP24.19■■□□□ 1.46
SALL3-202ENST00000537592 TRIM52Q96A61 297 aa24.13■■□□□ 1.45
SALL3-202ENST00000537592 HRCP23327 699 aa23.95■■□□□ 1.42
SALL3-202ENST00000537592 NEUROD1Q13562 356 aa23.81■■□□□ 1.4
SALL3-202ENST00000537592 BCANQ96GW7 911 aa23.8■■□□□ 1.4
SALL3-202ENST00000537592 ZNF326Q5BKZ1 582 aaKnown RBP23.79■■□□□ 1.4
SALL3-202ENST00000537592 CLSPNQ9HAW4 1339 aa23.78■■□□□ 1.4
SALL3-202ENST00000537592 ARID3CA6NKF2 412 aa23.68■■□□□ 1.38
SALL3-202ENST00000537592 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
SALL3-202ENST00000537592 ESF1Q9H501 851 aaKnown RBP23.66■■□□□ 1.38
SALL3-202ENST00000537592 CDK11AQ9UQ88 783 aaPredicted RBP23.63■■□□□ 1.37
SALL3-202ENST00000537592 MYT1Q01538 1121 aa23.6■■□□□ 1.37
SALL3-202ENST00000537592 ZNF777Q9ULD5 760 aaPredicted RBP23.59■■□□□ 1.37
SALL3-202ENST00000537592 ZNF316A6NFI3 1004 aaPredicted RBP23.59■■□□□ 1.37
SALL3-202ENST00000537592 ZBTB47Q9UFB7 747 aaPredicted RBP23.57■■□□□ 1.36
SALL3-202ENST00000537592 SLC24A1O60721 1099 aa23.57■■□□□ 1.36
SALL3-202ENST00000537592 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
SALL3-202ENST00000537592 NEFMP07197 916 aa23.55■■□□□ 1.36
SALL3-202ENST00000537592 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
SALL3-202ENST00000537592 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
SALL3-202ENST00000537592 ANP32CO43423 234 aa23.49■■□□□ 1.35
SALL3-202ENST00000537592 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
SALL3-202ENST00000537592 STAG3Q9UJ98 1225 aa23.42■■□□□ 1.34
SALL3-202ENST00000537592 CANXP27824 592 aaKnown RBP23.37■■□□□ 1.33
SALL3-202ENST00000537592 PLPPR3Q6T4P5 718 aa23.34■■□□□ 1.33
SALL3-202ENST00000537592 RTL5Q5HYW3 569 aaPredicted RBP23.33■■□□□ 1.33
SALL3-202ENST00000537592 CHGAP10645 457 aaKnown RBP23.32■■□□□ 1.32
SALL3-202ENST00000537592 BCL11AQ9H165 835 aa23.21■■□□□ 1.31
SALL3-202ENST00000537592 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
SALL3-202ENST00000537592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.05■■□□□ 1.28
SALL3-202ENST00000537592 TONSLQ96HA7 1378 aa23.04■■□□□ 1.28
SALL3-202ENST00000537592 TSPY4P0CV99 314 aa23.02■■□□□ 1.28
SALL3-202ENST00000537592 TSPY10P0CW01 314 aa23.02■■□□□ 1.28
SALL3-202ENST00000537592 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
SALL3-202ENST00000537592 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
SALL3-202ENST00000537592 CHIC2Q9UKJ5 165 aa22.95■■□□□ 1.26
SALL3-202ENST00000537592 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
SALL3-202ENST00000537592 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.26
SALL3-202ENST00000537592 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
SALL3-202ENST00000537592 KCNH8Q96L42 1107 aa22.8■■□□□ 1.24
SALL3-202ENST00000537592 PPP1R15AO75807 674 aaPredicted RBP22.78■■□□□ 1.24
SALL3-202ENST00000537592 PLEKHD1A6NEE1 506 aa22.76■■□□□ 1.23
SALL3-202ENST00000537592 KDM2AQ9Y2K7 1162 aa22.75■■□□□ 1.23
SALL3-202ENST00000537592 GTF3C3Q9Y5Q9 886 aa22.74■■□□□ 1.23
SALL3-202ENST00000537592 A0A0G2JS52 829 aa22.71■■□□□ 1.23
SALL3-202ENST00000537592 C14orf37Q86TY3 774 aa22.71■■□□□ 1.23
SALL3-202ENST00000537592 ARID4BQ4LE39 1312 aaPredicted RBP22.71■■□□□ 1.23
SALL3-202ENST00000537592 WDR43Q15061 677 aaKnown RBP eCLIP22.69■■□□□ 1.22
SALL3-202ENST00000537592 ANP32AP39687 249 aaKnown RBP22.68■■□□□ 1.22
SALL3-202ENST00000537592 NPM2Q86SE8 214 aaKnown RBP22.67■■□□□ 1.22
SALL3-202ENST00000537592 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
SALL3-202ENST00000537592 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
SALL3-202ENST00000537592 FAM9BQ8IZU0 186 aa22.66■■□□□ 1.22
SALL3-202ENST00000537592 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
SALL3-202ENST00000537592 ZBTB7CA1YPR0 619 aa22.64■■□□□ 1.21
SALL3-202ENST00000537592 HSP90AA1P07900 732 aaKnown RBP22.62■■□□□ 1.21
SALL3-202ENST00000537592 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
SALL3-202ENST00000537592 HNRNPUQ00839 825 aaKnown RBP eCLIP22.61■■□□□ 1.21
SALL3-202ENST00000537592 CLIP1P30622 1438 aa22.61■■□□□ 1.21
SALL3-202ENST00000537592 DDX10Q13206 875 aaKnown RBP22.61■■□□□ 1.21
SALL3-202ENST00000537592 SALL2Q9Y467 1007 aaPredicted RBP22.61■■□□□ 1.21
SALL3-202ENST00000537592 UPF2Q9HAU5 1272 aaKnown RBP22.61■■□□□ 1.21
SALL3-202ENST00000537592 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.6■■□□□ 1.21
SALL3-202ENST00000537592 NACADO15069 1562 aa22.57■■□□□ 1.2
SALL3-202ENST00000537592 PLEKHG5O94827 1062 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms