Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 AC073592.4-201ENST00000623827 446 ntBASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 TCAF2P1-201ENST00000291129 2421 ntBASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CKAP2Q8WWK9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 AC005521.1-201ENST00000393351 872 ntBASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 AL137013.1-201ENST00000432946 1228 ntBASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 VENTXP7-201ENST00000475503 772 ntBASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 AC091167.2-201ENST00000579581 588 ntBASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 AC020765.3-201ENST00000613051 740 ntBASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CKAP2Q8WWK9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CKAP2Q8WWK9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CKAP2Q8WWK9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CKAP2Q8WWK9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CKAP2Q8WWK9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CKAP2Q8WWK9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CKAP2Q8WWK9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CKAP2Q8WWK9 LINC01101-201ENST00000622953 1884 ntBASIC16.33■□□□□ 0.21
CKAP2Q8WWK9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CKAP2Q8WWK9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 TMPOP1-202ENST00000424642 1267 ntBASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 CYP2A7P1-201ENST00000595391 815 ntBASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 REXO1L3P-201ENST00000622202 1288 ntBASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms