Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 CICP13-201ENST00000422015 2789 ntBASIC12.51□□□□□ -0.41
AP1S3Q96PC3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP1S3Q96PC3 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 LIN28AP1-201ENST00000429574 405 ntBASIC12.5□□□□□ -0.41
AP1S3Q96PC3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.5□□□□□ -0.41
AP1S3Q96PC3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 ATP5G1P1-201ENST00000448724 379 ntBASIC12.5□□□□□ -0.41
AP1S3Q96PC3 AL359075.1-203ENST00000462729 1002 ntBASIC12.5□□□□□ -0.41
AP1S3Q96PC3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 AC019129.2-201ENST00000609837 1235 ntBASIC12.5□□□□□ -0.41
AP1S3Q96PC3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms