Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB42Q8N4Z0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 AP000344.2-201ENST00000512987 629 ntBASIC16■□□□□ 0.15
RAB42Q8N4Z0 AC105233.2-201ENST00000523697 349 ntBASIC16■□□□□ 0.15
RAB42Q8N4Z0 AF228730.5-201ENST00000530288 346 ntBASIC16■□□□□ 0.15
RAB42Q8N4Z0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAB42Q8N4Z0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
RAB42Q8N4Z0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 U82695.1-201ENST00000635752 1889 ntBASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms