Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
TFCP2L1Q9NZI6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.63■■■□□ 2.49
TFCP2L1Q9NZI6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.63■■■□□ 2.49
TFCP2L1Q9NZI6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TFCP2L1Q9NZI6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
TFCP2L1Q9NZI6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TFCP2L1Q9NZI6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TFCP2L1Q9NZI6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.61■■■□□ 2.49
TFCP2L1Q9NZI6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.61■■■□□ 2.49
TFCP2L1Q9NZI6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.61■■■□□ 2.49
TFCP2L1Q9NZI6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TFCP2L1Q9NZI6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.61■■■□□ 2.49
TFCP2L1Q9NZI6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.61■■■□□ 2.49
TFCP2L1Q9NZI6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TFCP2L1Q9NZI6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.6■■■□□ 2.49
TFCP2L1Q9NZI6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TFCP2L1Q9NZI6 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.6■■■□□ 2.49
TFCP2L1Q9NZI6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.59■■■□□ 2.49
TFCP2L1Q9NZI6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TFCP2L1Q9NZI6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.59■■■□□ 2.49
TFCP2L1Q9NZI6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TFCP2L1Q9NZI6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TFCP2L1Q9NZI6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TFCP2L1Q9NZI6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TFCP2L1Q9NZI6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TFCP2L1Q9NZI6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
TFCP2L1Q9NZI6 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.58■■■□□ 2.49
TFCP2L1Q9NZI6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.58■■■□□ 2.49
TFCP2L1Q9NZI6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TFCP2L1Q9NZI6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TFCP2L1Q9NZI6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TFCP2L1Q9NZI6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
TFCP2L1Q9NZI6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
TFCP2L1Q9NZI6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TFCP2L1Q9NZI6 SUDS3P1-201ENST00000505831 966 ntBASIC30.57■■■□□ 2.48
TFCP2L1Q9NZI6 AL031432.3-201ENST00000607698 485 ntBASIC30.57■■■□□ 2.48
TFCP2L1Q9NZI6 AL449106.1-201ENST00000608517 1980 ntBASIC30.57■■■□□ 2.48
TFCP2L1Q9NZI6 UNC93B3-201ENST00000308076 687 ntBASIC30.56■■■□□ 2.48
TFCP2L1Q9NZI6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
TFCP2L1Q9NZI6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.56■■■□□ 2.48
TFCP2L1Q9NZI6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.56■■■□□ 2.48
TFCP2L1Q9NZI6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.56■■■□□ 2.48
TFCP2L1Q9NZI6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TFCP2L1Q9NZI6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.55■■■□□ 2.48
TFCP2L1Q9NZI6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC30.55■■■□□ 2.48
TFCP2L1Q9NZI6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.55■■■□□ 2.48
TFCP2L1Q9NZI6 AC011551.1-201ENST00000614101 683 ntBASIC30.55■■■□□ 2.48
TFCP2L1Q9NZI6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TFCP2L1Q9NZI6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.54■■■□□ 2.48
TFCP2L1Q9NZI6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.54■■■□□ 2.48
TFCP2L1Q9NZI6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TFCP2L1Q9NZI6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TFCP2L1Q9NZI6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.53■■■□□ 2.48
TFCP2L1Q9NZI6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TFCP2L1Q9NZI6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.53■■■□□ 2.48
TFCP2L1Q9NZI6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TFCP2L1Q9NZI6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.52■■■□□ 2.48
TFCP2L1Q9NZI6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.52■■■□□ 2.48
TFCP2L1Q9NZI6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.52■■■□□ 2.48
TFCP2L1Q9NZI6 AL136162.1-201ENST00000607711 1078 ntBASIC30.51■■■□□ 2.47
TFCP2L1Q9NZI6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TFCP2L1Q9NZI6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TFCP2L1Q9NZI6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.5■■■□□ 2.47
TFCP2L1Q9NZI6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.5■■■□□ 2.47
TFCP2L1Q9NZI6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
TFCP2L1Q9NZI6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30.5■■■□□ 2.47
TFCP2L1Q9NZI6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.5■■■□□ 2.47
TFCP2L1Q9NZI6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
TFCP2L1Q9NZI6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
TFCP2L1Q9NZI6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
TFCP2L1Q9NZI6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TFCP2L1Q9NZI6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.49■■■□□ 2.47
TFCP2L1Q9NZI6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TFCP2L1Q9NZI6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
TFCP2L1Q9NZI6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TFCP2L1Q9NZI6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.48■■■□□ 2.47
TFCP2L1Q9NZI6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
TFCP2L1Q9NZI6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TFCP2L1Q9NZI6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TFCP2L1Q9NZI6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
TFCP2L1Q9NZI6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
TFCP2L1Q9NZI6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.47■■■□□ 2.47
TFCP2L1Q9NZI6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.47■■■□□ 2.47
TFCP2L1Q9NZI6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TFCP2L1Q9NZI6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
TFCP2L1Q9NZI6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TFCP2L1Q9NZI6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
TFCP2L1Q9NZI6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
TFCP2L1Q9NZI6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TFCP2L1Q9NZI6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.45■■■□□ 2.47
TFCP2L1Q9NZI6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
TFCP2L1Q9NZI6 BX255925.1-201ENST00000566954 1854 ntBASIC30.44■■■□□ 2.46
TFCP2L1Q9NZI6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TFCP2L1Q9NZI6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
TFCP2L1Q9NZI6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.44■■■□□ 2.46
TFCP2L1Q9NZI6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TFCP2L1Q9NZI6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TFCP2L1Q9NZI6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.43■■■□□ 2.46
TFCP2L1Q9NZI6 AL355001.2-201ENST00000620617 1191 ntBASIC30.43■■■□□ 2.46
TFCP2L1Q9NZI6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms