Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.48■□□□□ 0.55
TRGV9Q99603 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRGV9Q99603 LINC00543-201ENST00000567234 1845 ntBASIC18.48■□□□□ 0.55
TRGV9Q99603 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRGV9Q99603 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TRGV9Q99603 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRGV9Q99603 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.48■□□□□ 0.55
TRGV9Q99603 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
TRGV9Q99603 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRGV9Q99603 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV9Q99603 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
TRGV9Q99603 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRGV9Q99603 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
TRGV9Q99603 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV9Q99603 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV9Q99603 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV9Q99603 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV9Q99603 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV9Q99603 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.46■□□□□ 0.55
TRGV9Q99603 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRGV9Q99603 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRGV9Q99603 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.46■□□□□ 0.55
TRGV9Q99603 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.46■□□□□ 0.55
TRGV9Q99603 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.46■□□□□ 0.55
TRGV9Q99603 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRGV9Q99603 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRGV9Q99603 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRGV9Q99603 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.46■□□□□ 0.54
TRGV9Q99603 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRGV9Q99603 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV9Q99603 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV9Q99603 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRGV9Q99603 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV9Q99603 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV9Q99603 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV9Q99603 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV9Q99603 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV9Q99603 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.45■□□□□ 0.54
TRGV9Q99603 AC060814.1-201ENST00000554326 538 ntBASIC18.45■□□□□ 0.54
TRGV9Q99603 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.45■□□□□ 0.54
TRGV9Q99603 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.45■□□□□ 0.54
TRGV9Q99603 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV9Q99603 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.45■□□□□ 0.54
TRGV9Q99603 SMPD5-203ENST00000639008 1464 ntBASIC18.45■□□□□ 0.54
TRGV9Q99603 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV9Q99603 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.44■□□□□ 0.54
TRGV9Q99603 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV9Q99603 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV9Q99603 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV9Q99603 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV9Q99603 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRGV9Q99603 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV9Q99603 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRGV9Q99603 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV9Q99603 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV9Q99603 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV9Q99603 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV9Q99603 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRGV9Q99603 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRGV9Q99603 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.43■□□□□ 0.54
TRGV9Q99603 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.43■□□□□ 0.54
TRGV9Q99603 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.43■□□□□ 0.54
TRGV9Q99603 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRGV9Q99603 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRGV9Q99603 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRGV9Q99603 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.43■□□□□ 0.54
TRGV9Q99603 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRGV9Q99603 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV9Q99603 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV9Q99603 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.41■□□□□ 0.54
TRGV9Q99603 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRGV9Q99603 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.41■□□□□ 0.54
TRGV9Q99603 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV9Q99603 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRGV9Q99603 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.41■□□□□ 0.54
TRGV9Q99603 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.41■□□□□ 0.54
TRGV9Q99603 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV9Q99603 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
TRGV9Q99603 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRGV9Q99603 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV9Q99603 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.41■□□□□ 0.54
TRGV9Q99603 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.41■□□□□ 0.54
TRGV9Q99603 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.41■□□□□ 0.54
TRGV9Q99603 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV9Q99603 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV9Q99603 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV9Q99603 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV9Q99603 MIR6089-201ENST00000616698 64 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms