Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASD1Q96PB1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
CASD1Q96PB1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CASD1Q96PB1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.72■■□□□ 1.71
CASD1Q96PB1 AC092028.1-203ENST00000608262 953 ntBASIC25.72■■□□□ 1.71
CASD1Q96PB1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASD1Q96PB1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.71■■□□□ 1.71
CASD1Q96PB1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.71■■□□□ 1.71
CASD1Q96PB1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.71■■□□□ 1.71
CASD1Q96PB1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASD1Q96PB1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
CASD1Q96PB1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASD1Q96PB1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASD1Q96PB1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.69■■□□□ 1.7
CASD1Q96PB1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.69■■□□□ 1.7
CASD1Q96PB1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CASD1Q96PB1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.69■■□□□ 1.7
CASD1Q96PB1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.68■■□□□ 1.7
CASD1Q96PB1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.68■■□□□ 1.7
CASD1Q96PB1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CASD1Q96PB1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.66■■□□□ 1.7
CASD1Q96PB1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.66■■□□□ 1.7
CASD1Q96PB1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASD1Q96PB1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.66■■□□□ 1.7
CASD1Q96PB1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASD1Q96PB1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASD1Q96PB1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CASD1Q96PB1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CASD1Q96PB1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.64■■□□□ 1.7
CASD1Q96PB1 AC011551.1-201ENST00000614101 683 ntBASIC25.64■■□□□ 1.7
CASD1Q96PB1 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.64■■□□□ 1.7
CASD1Q96PB1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CASD1Q96PB1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CASD1Q96PB1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASD1Q96PB1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CASD1Q96PB1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASD1Q96PB1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASD1Q96PB1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASD1Q96PB1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.62■■□□□ 1.69
CASD1Q96PB1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASD1Q96PB1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASD1Q96PB1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.61■■□□□ 1.69
CASD1Q96PB1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.61■■□□□ 1.69
CASD1Q96PB1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.61■■□□□ 1.69
CASD1Q96PB1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.61■■□□□ 1.69
CASD1Q96PB1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.61■■□□□ 1.69
CASD1Q96PB1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.61■■□□□ 1.69
CASD1Q96PB1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASD1Q96PB1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.6■■□□□ 1.69
CASD1Q96PB1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CASD1Q96PB1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASD1Q96PB1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CASD1Q96PB1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASD1Q96PB1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASD1Q96PB1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASD1Q96PB1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.59■■□□□ 1.69
CASD1Q96PB1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.59■■□□□ 1.69
CASD1Q96PB1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASD1Q96PB1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CASD1Q96PB1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASD1Q96PB1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CASD1Q96PB1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.68
CASD1Q96PB1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
CASD1Q96PB1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASD1Q96PB1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASD1Q96PB1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CASD1Q96PB1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.57■■□□□ 1.68
CASD1Q96PB1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASD1Q96PB1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CASD1Q96PB1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.57■■□□□ 1.68
CASD1Q96PB1 AC010997.5-201ENST00000609182 354 ntBASIC25.57■■□□□ 1.68
CASD1Q96PB1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CASD1Q96PB1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CASD1Q96PB1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.56■■□□□ 1.68
CASD1Q96PB1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.56■■□□□ 1.68
CASD1Q96PB1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
CASD1Q96PB1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CASD1Q96PB1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.56■■□□□ 1.68
CASD1Q96PB1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CASD1Q96PB1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CASD1Q96PB1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASD1Q96PB1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASD1Q96PB1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASD1Q96PB1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASD1Q96PB1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.55■■□□□ 1.68
CASD1Q96PB1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CASD1Q96PB1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CASD1Q96PB1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CASD1Q96PB1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.55■■□□□ 1.68
CASD1Q96PB1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.55■■□□□ 1.68
CASD1Q96PB1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.55■■□□□ 1.68
CASD1Q96PB1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.55■■□□□ 1.68
CASD1Q96PB1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASD1Q96PB1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASD1Q96PB1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASD1Q96PB1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASD1Q96PB1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.54■■□□□ 1.68
CASD1Q96PB1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.54■■□□□ 1.68
CASD1Q96PB1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.54■■□□□ 1.68
CASD1Q96PB1 AC131281.2-201ENST00000520478 145 ntBASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms