Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.81■■□□□ 1.56
ZSWIM3Q96MP5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.81■■□□□ 1.56
ZSWIM3Q96MP5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.8■■□□□ 1.56
ZSWIM3Q96MP5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
ZSWIM3Q96MP5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ZSWIM3Q96MP5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.8■■□□□ 1.56
ZSWIM3Q96MP5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZSWIM3Q96MP5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.79■■□□□ 1.56
ZSWIM3Q96MP5 MIR4281-201ENST00000580852 62 ntBASIC24.79■■□□□ 1.56
ZSWIM3Q96MP5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
ZSWIM3Q96MP5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.78■■□□□ 1.56
ZSWIM3Q96MP5 AC092028.1-203ENST00000608262 953 ntBASIC24.78■■□□□ 1.56
ZSWIM3Q96MP5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZSWIM3Q96MP5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.78■■□□□ 1.56
ZSWIM3Q96MP5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZSWIM3Q96MP5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZSWIM3Q96MP5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZSWIM3Q96MP5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.77■■□□□ 1.56
ZSWIM3Q96MP5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
ZSWIM3Q96MP5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZSWIM3Q96MP5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.76■■□□□ 1.55
ZSWIM3Q96MP5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.76■■□□□ 1.55
ZSWIM3Q96MP5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
ZSWIM3Q96MP5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZSWIM3Q96MP5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZSWIM3Q96MP5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.76■■□□□ 1.55
ZSWIM3Q96MP5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.76■■□□□ 1.55
ZSWIM3Q96MP5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ZSWIM3Q96MP5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
ZSWIM3Q96MP5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.75■■□□□ 1.55
ZSWIM3Q96MP5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.74■■□□□ 1.55
ZSWIM3Q96MP5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.73■■□□□ 1.55
ZSWIM3Q96MP5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZSWIM3Q96MP5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.73■■□□□ 1.55
ZSWIM3Q96MP5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
ZSWIM3Q96MP5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.72■■□□□ 1.55
ZSWIM3Q96MP5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZSWIM3Q96MP5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZSWIM3Q96MP5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.71■■□□□ 1.55
ZSWIM3Q96MP5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.71■■□□□ 1.55
ZSWIM3Q96MP5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.71■■□□□ 1.55
ZSWIM3Q96MP5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZSWIM3Q96MP5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ZSWIM3Q96MP5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ZSWIM3Q96MP5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZSWIM3Q96MP5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
ZSWIM3Q96MP5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZSWIM3Q96MP5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.7■■□□□ 1.54
ZSWIM3Q96MP5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.69■■□□□ 1.54
ZSWIM3Q96MP5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.69■■□□□ 1.54
ZSWIM3Q96MP5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
ZSWIM3Q96MP5 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.69■■□□□ 1.54
ZSWIM3Q96MP5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZSWIM3Q96MP5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.68■■□□□ 1.54
ZSWIM3Q96MP5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM3Q96MP5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM3Q96MP5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM3Q96MP5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.68■■□□□ 1.54
ZSWIM3Q96MP5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
ZSWIM3Q96MP5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM3Q96MP5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
ZSWIM3Q96MP5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZSWIM3Q96MP5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZSWIM3Q96MP5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.67■■□□□ 1.54
ZSWIM3Q96MP5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.67■■□□□ 1.54
ZSWIM3Q96MP5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZSWIM3Q96MP5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
ZSWIM3Q96MP5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
ZSWIM3Q96MP5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZSWIM3Q96MP5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM3Q96MP5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.66■■□□□ 1.54
ZSWIM3Q96MP5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.66■■□□□ 1.54
ZSWIM3Q96MP5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.66■■□□□ 1.54
ZSWIM3Q96MP5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM3Q96MP5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM3Q96MP5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.66■■□□□ 1.54
ZSWIM3Q96MP5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.66■■□□□ 1.54
ZSWIM3Q96MP5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
ZSWIM3Q96MP5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZSWIM3Q96MP5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.65■■□□□ 1.54
ZSWIM3Q96MP5 AC011551.1-201ENST00000614101 683 ntBASIC24.65■■□□□ 1.54
ZSWIM3Q96MP5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZSWIM3Q96MP5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
ZSWIM3Q96MP5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.64■■□□□ 1.54
ZSWIM3Q96MP5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZSWIM3Q96MP5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZSWIM3Q96MP5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZSWIM3Q96MP5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZSWIM3Q96MP5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
ZSWIM3Q96MP5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.64■■□□□ 1.54
ZSWIM3Q96MP5 AC010997.5-201ENST00000609182 354 ntBASIC24.64■■□□□ 1.54
ZSWIM3Q96MP5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.64■■□□□ 1.53
ZSWIM3Q96MP5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
ZSWIM3Q96MP5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM3Q96MP5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
ZSWIM3Q96MP5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM3Q96MP5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM3Q96MP5 AC131281.2-201ENST00000520478 145 ntBASIC24.63■■□□□ 1.53
ZSWIM3Q96MP5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.63■■□□□ 1.53
ZSWIM3Q96MP5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms