Protein–RNA interactions for Protein: Q8IUG1

KRTAP1-3, Keratin-associated protein 1-3, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP1-3Q8IUG1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRTAP1-3Q8IUG1 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.97■□□□□ 0.79
KRTAP1-3Q8IUG1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
KRTAP1-3Q8IUG1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRTAP1-3Q8IUG1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.97■□□□□ 0.79
KRTAP1-3Q8IUG1 AC011551.1-201ENST00000614101 683 ntBASIC19.97■□□□□ 0.79
KRTAP1-3Q8IUG1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.97■□□□□ 0.79
KRTAP1-3Q8IUG1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRTAP1-3Q8IUG1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 PBX2P1-201ENST00000493219 1291 ntBASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 AC142381.2-201ENST00000566120 298 ntBASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 BX255925.1-201ENST00000566954 1854 ntBASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 AC135279.3-201ENST00000610945 1311 ntBASIC19.96■□□□□ 0.79
KRTAP1-3Q8IUG1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.95■□□□□ 0.78
KRTAP1-3Q8IUG1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTAP1-3Q8IUG1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTAP1-3Q8IUG1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KRTAP1-3Q8IUG1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTAP1-3Q8IUG1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTAP1-3Q8IUG1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRTAP1-3Q8IUG1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRTAP1-3Q8IUG1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
KRTAP1-3Q8IUG1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRTAP1-3Q8IUG1 SUDS3P1-201ENST00000505831 966 ntBASIC19.94■□□□□ 0.78
KRTAP1-3Q8IUG1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.94■□□□□ 0.78
KRTAP1-3Q8IUG1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.94■□□□□ 0.78
KRTAP1-3Q8IUG1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.94■□□□□ 0.78
KRTAP1-3Q8IUG1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRTAP1-3Q8IUG1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRTAP1-3Q8IUG1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 AC104564.3-201ENST00000582367 638 ntBASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRTAP1-3Q8IUG1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.92■□□□□ 0.78
KRTAP1-3Q8IUG1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.92■□□□□ 0.78
KRTAP1-3Q8IUG1 AF131216.4-201ENST00000638924 1588 ntBASIC19.91■□□□□ 0.78
KRTAP1-3Q8IUG1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KRTAP1-3Q8IUG1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRTAP1-3Q8IUG1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRTAP1-3Q8IUG1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.91■□□□□ 0.78
KRTAP1-3Q8IUG1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.91■□□□□ 0.78
KRTAP1-3Q8IUG1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KRTAP1-3Q8IUG1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRTAP1-3Q8IUG1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 MIR5787-201ENST00000611784 55 ntBASIC19.89■□□□□ 0.77
KRTAP1-3Q8IUG1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 UNC93B3-201ENST00000308076 687 ntBASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
KRTAP1-3Q8IUG1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
KRTAP1-3Q8IUG1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.87■□□□□ 0.77
KRTAP1-3Q8IUG1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
KRTAP1-3Q8IUG1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRTAP1-3Q8IUG1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRTAP1-3Q8IUG1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.87■□□□□ 0.77
KRTAP1-3Q8IUG1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRTAP1-3Q8IUG1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.86■□□□□ 0.77
KRTAP1-3Q8IUG1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRTAP1-3Q8IUG1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRTAP1-3Q8IUG1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRTAP1-3Q8IUG1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRTAP1-3Q8IUG1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRTAP1-3Q8IUG1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms