Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.22■□□□□ 0.99
TUBAL3A6NHL2 AC131212.1-201ENST00000613771 668 ntBASIC21.22■□□□□ 0.99
TUBAL3A6NHL2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBAL3A6NHL2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TUBAL3A6NHL2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBAL3A6NHL2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TUBAL3A6NHL2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBAL3A6NHL2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBAL3A6NHL2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TUBAL3A6NHL2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TUBAL3A6NHL2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TUBAL3A6NHL2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
TUBAL3A6NHL2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 RPS2P7-201ENST00000447334 885 ntBASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBAL3A6NHL2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TUBAL3A6NHL2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
TUBAL3A6NHL2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBAL3A6NHL2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TUBAL3A6NHL2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBAL3A6NHL2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBAL3A6NHL2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBAL3A6NHL2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 AL592295.1-201ENST00000400984 884 ntBASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBAL3A6NHL2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBAL3A6NHL2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBAL3A6NHL2 KRT18P10-201ENST00000388836 1287 ntBASIC21.17■□□□□ 0.98
TUBAL3A6NHL2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.17■□□□□ 0.98
TUBAL3A6NHL2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TUBAL3A6NHL2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TUBAL3A6NHL2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBAL3A6NHL2 LINC00543-201ENST00000567234 1845 ntBASIC21.16■□□□□ 0.98
TUBAL3A6NHL2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBAL3A6NHL2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBAL3A6NHL2 THA1P-201ENST00000590384 1145 ntBASIC21.16■□□□□ 0.98
TUBAL3A6NHL2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBAL3A6NHL2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBAL3A6NHL2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBAL3A6NHL2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 LONRF2P2-201ENST00000439212 571 ntBASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBAL3A6NHL2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBAL3A6NHL2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TUBAL3A6NHL2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.14■□□□□ 0.97
TUBAL3A6NHL2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.14■□□□□ 0.97
TUBAL3A6NHL2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.14■□□□□ 0.97
TUBAL3A6NHL2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TUBAL3A6NHL2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
TUBAL3A6NHL2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TUBAL3A6NHL2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBAL3A6NHL2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBAL3A6NHL2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.13■□□□□ 0.97
TUBAL3A6NHL2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TUBAL3A6NHL2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TUBAL3A6NHL2 AC239859.2-201ENST00000444165 318 ntBASIC21.13■□□□□ 0.97
TUBAL3A6NHL2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.13■□□□□ 0.97
TUBAL3A6NHL2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBAL3A6NHL2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBAL3A6NHL2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.12■□□□□ 0.97
TUBAL3A6NHL2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TUBAL3A6NHL2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.12■□□□□ 0.97
TUBAL3A6NHL2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TUBAL3A6NHL2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.12■□□□□ 0.97
TUBAL3A6NHL2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TUBAL3A6NHL2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TUBAL3A6NHL2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TUBAL3A6NHL2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TUBAL3A6NHL2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.11■□□□□ 0.97
TUBAL3A6NHL2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TUBAL3A6NHL2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms