Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.5□□□□□ -0.25
SSSCA1O60232 TSPY22P-201ENST00000427496 604 ntBASIC13.5□□□□□ -0.25
SSSCA1O60232 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SSSCA1O60232 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.5□□□□□ -0.25
SSSCA1O60232 HOMER2P1-201ENST00000455653 964 ntBASIC13.5□□□□□ -0.25
SSSCA1O60232 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 IGHV3-41-201ENST00000613121 348 ntBASIC13.5□□□□□ -0.25
SSSCA1O60232 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
SSSCA1O60232 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.5□□□□□ -0.25
SSSCA1O60232 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SSSCA1O60232 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SSSCA1O60232 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SSSCA1O60232 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.5□□□□□ -0.25
SSSCA1O60232 AC006058.4-201ENST00000624016 1670 ntBASIC13.5□□□□□ -0.25
SSSCA1O60232 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSSCA1O60232 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SSSCA1O60232 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 AC112504.1-201ENST00000623415 1841 ntBASIC13.49□□□□□ -0.25
SSSCA1O60232 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 BX664615.1-201ENST00000443558 458 ntBASIC13.49□□□□□ -0.25
SSSCA1O60232 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.49□□□□□ -0.25
SSSCA1O60232 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 AL512652.2-201ENST00000625156 1716 ntBASIC13.49□□□□□ -0.25
SSSCA1O60232 AP003680.1-201ENST00000598970 3660 ntBASIC13.49□□□□□ -0.25
SSSCA1O60232 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SSSCA1O60232 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSSCA1O60232 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.49□□□□□ -0.25
SSSCA1O60232 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SSSCA1O60232 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.48□□□□□ -0.25
SSSCA1O60232 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SSSCA1O60232 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 AC243591.1-201ENST00000452967 1364 ntBASIC13.48□□□□□ -0.25
SSSCA1O60232 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.48□□□□□ -0.25
SSSCA1O60232 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SSSCA1O60232 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.48□□□□□ -0.25
SSSCA1O60232 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 AL020989.1-201ENST00000422979 469 ntBASIC13.48□□□□□ -0.25
SSSCA1O60232 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 AC117947.1-201ENST00000427448 529 ntBASIC13.48□□□□□ -0.25
SSSCA1O60232 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms