Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CNN2P3-201ENST00000450201 906 ntBASIC18.53■□□□□ 0.56
DDX39AO00148 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX39AO00148 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX39AO00148 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX39AO00148 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.53■□□□□ 0.56
DDX39AO00148 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 AC020765.3-201ENST00000613051 740 ntBASIC18.53■□□□□ 0.56
DDX39AO00148 AP3S2-216ENST00000617003 1561 ntBASIC18.53■□□□□ 0.56
DDX39AO00148 AL136317.3-201ENST00000618497 906 ntBASIC18.53■□□□□ 0.56
DDX39AO00148 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DDX39AO00148 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX39AO00148 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX39AO00148 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DDX39AO00148 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX39AO00148 TUBB3P1-201ENST00000405796 1332 ntBASIC18.52■□□□□ 0.56
DDX39AO00148 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX39AO00148 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX39AO00148 PCGF3-213ENST00000620529 1899 ntBASIC18.52■□□□□ 0.56
DDX39AO00148 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.52■□□□□ 0.56
DDX39AO00148 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
DDX39AO00148 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
DDX39AO00148 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
DDX39AO00148 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX39AO00148 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
DDX39AO00148 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
DDX39AO00148 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX39AO00148 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX39AO00148 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX39AO00148 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX39AO00148 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DDX39AO00148 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX39AO00148 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
DDX39AO00148 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
DDX39AO00148 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.52■□□□□ 0.55
DDX39AO00148 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
DDX39AO00148 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
DDX39AO00148 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.51■□□□□ 0.55
DDX39AO00148 GGT3P-204ENST00000453783 1664 ntBASIC18.51■□□□□ 0.55
DDX39AO00148 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DDX39AO00148 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.51■□□□□ 0.55
DDX39AO00148 AC125807.1-201ENST00000483097 614 ntBASIC18.51■□□□□ 0.55
DDX39AO00148 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.51■□□□□ 0.55
DDX39AO00148 RARRES2P9-201ENST00000565168 469 ntBASIC18.51■□□□□ 0.55
DDX39AO00148 MIR4453-201ENST00000584019 89 ntBASIC18.51■□□□□ 0.55
DDX39AO00148 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.51■□□□□ 0.55
DDX39AO00148 SPTSSB-204ENST00000617024 1292 ntBASIC18.51■□□□□ 0.55
DDX39AO00148 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX39AO00148 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX39AO00148 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.51■□□□□ 0.55
DDX39AO00148 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
DDX39AO00148 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX39AO00148 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DDX39AO00148 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.5■□□□□ 0.55
DDX39AO00148 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 NKILA-202ENST00000614771 2598 ntBASIC18.5■□□□□ 0.55
DDX39AO00148 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.5■□□□□ 0.55
DDX39AO00148 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms