RNA–Protein interactions for RNA: ENST00000434054.6

CLCN2-204, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCN2, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-204ENST00000434054 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
CLCN2-204ENST00000434054 CCDC180Q9P1Z9 1646 aa30.31■■■□□ 2.44
CLCN2-204ENST00000434054 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
CLCN2-204ENST00000434054 DCAF8L2P0C7V8 631 aa29.91■■■□□ 2.38
CLCN2-204ENST00000434054 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
CLCN2-204ENST00000434054 ZCCHC6Q5VYS8 1495 aaKnown RBP29.51■■■□□ 2.32
CLCN2-204ENST00000434054 ABCC9O60706 1549 aa29.31■■■□□ 2.28
CLCN2-204ENST00000434054 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.22
CLCN2-204ENST00000434054 HRCP23327 699 aa28.84■■■□□ 2.21
CLCN2-204ENST00000434054 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
CLCN2-204ENST00000434054 PCGF6Q9BYE7 350 aa28.77■■■□□ 2.2
CLCN2-204ENST00000434054 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
CLCN2-204ENST00000434054 PPARGC1BQ86YN6 1023 aaKnown RBP28.58■■■□□ 2.17
CLCN2-204ENST00000434054 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
CLCN2-204ENST00000434054 NACADO15069 1562 aa28.36■■■□□ 2.13
CLCN2-204ENST00000434054 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
CLCN2-204ENST00000434054 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
CLCN2-204ENST00000434054 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.05
CLCN2-204ENST00000434054 TRIM26Q12899 539 aaPredicted RBP27.76■■■□□ 2.03
CLCN2-204ENST00000434054 EHMT2Q96KQ7 1210 aa27.61■■■□□ 2.01
CLCN2-204ENST00000434054 CECR2Q9BXF3 1484 aa27.6■■■□□ 2.01
CLCN2-204ENST00000434054 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
CLCN2-204ENST00000434054 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
CLCN2-204ENST00000434054 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
CLCN2-204ENST00000434054 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
CLCN2-204ENST00000434054 BICRAQ9NZM4 1560 aa27.38■■□□□ 1.97
CLCN2-204ENST00000434054 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
CLCN2-204ENST00000434054 ZEB1P37275 1124 aaPredicted RBP27.19■■□□□ 1.94
CLCN2-204ENST00000434054 WIZO95785 1651 aa27.12■■□□□ 1.93
CLCN2-204ENST00000434054 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
CLCN2-204ENST00000434054 SCAF1Q9H7N4 1312 aaKnown RBP27.09■■□□□ 1.93
CLCN2-204ENST00000434054 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
CLCN2-204ENST00000434054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
CLCN2-204ENST00000434054 TTBK1Q5TCY1 1321 aaPredicted RBP26.79■■□□□ 1.88
CLCN2-204ENST00000434054 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
CLCN2-204ENST00000434054 PELP1Q8IZL8 1130 aaKnown RBP26.7■■□□□ 1.87
CLCN2-204ENST00000434054 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
CLCN2-204ENST00000434054 ATAD2BQ9ULI0 1458 aa26.63■■□□□ 1.85
CLCN2-204ENST00000434054 EIF4G1Q04637 1599 aaKnown RBP26.62■■□□□ 1.85
CLCN2-204ENST00000434054 NEUROD1Q13562 356 aa26.59■■□□□ 1.85
CLCN2-204ENST00000434054 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
CLCN2-204ENST00000434054 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
CLCN2-204ENST00000434054 ACIN1Q9UKV3 1341 aaKnown RBP26.51■■□□□ 1.83
CLCN2-204ENST00000434054 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
CLCN2-204ENST00000434054 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
CLCN2-204ENST00000434054 DIEXFQ68CQ4 756 aaKnown RBP26.44■■□□□ 1.82
CLCN2-204ENST00000434054 GTF3C3Q9Y5Q9 886 aa26.39■■□□□ 1.81
CLCN2-204ENST00000434054 NCAPD3P42695 1498 aa26.27■■□□□ 1.8
CLCN2-204ENST00000434054 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
CLCN2-204ENST00000434054 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
CLCN2-204ENST00000434054 CENPBP07199 599 aaPredicted RBP26.2■■□□□ 1.78
CLCN2-204ENST00000434054 YTHDC1Q96MU7 727 aaKnown RBP26.17■■□□□ 1.78
CLCN2-204ENST00000434054 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
CLCN2-204ENST00000434054 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
CLCN2-204ENST00000434054 CEP162Q5TB80 1403 aa26.11■■□□□ 1.77
CLCN2-204ENST00000434054 SOGA1O94964 1423 aa26.1■■□□□ 1.77
CLCN2-204ENST00000434054 DNAJC5BQ9UF47 199 aa26.07■■□□□ 1.76
CLCN2-204ENST00000434054 ZNF316A6NFI3 1004 aaPredicted RBP25.98■■□□□ 1.75
CLCN2-204ENST00000434054 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
CLCN2-204ENST00000434054 HNRNPUL2Q1KMD3 747 aaKnown RBP25.98■■□□□ 1.75
CLCN2-204ENST00000434054 WRNQ14191 1432 aaPredicted RBP eCLIP25.96■■□□□ 1.75
CLCN2-204ENST00000434054 CSRNP3Q8WYN3 585 aa25.94■■□□□ 1.74
CLCN2-204ENST00000434054 TNIKQ9UKE5 1360 aa25.88■■□□□ 1.73
CLCN2-204ENST00000434054 MIER1Q8N108 512 aa25.87■■□□□ 1.73
CLCN2-204ENST00000434054 RANGAP1P46060 587 aaPredicted RBP25.85■■□□□ 1.73
CLCN2-204ENST00000434054 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
CLCN2-204ENST00000434054 CFTRP13569 1480 aa25.76■■□□□ 1.72
CLCN2-204ENST00000434054 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
CLCN2-204ENST00000434054 NESP48681 1621 aa25.73■■□□□ 1.71
CLCN2-204ENST00000434054 GOLGA3Q08378 1498 aa25.63■■□□□ 1.69
CLCN2-204ENST00000434054 EEA1Q15075 1411 aa25.57■■□□□ 1.68
CLCN2-204ENST00000434054 APLP2Q06481 763 aa25.54■■□□□ 1.68
CLCN2-204ENST00000434054 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
CLCN2-204ENST00000434054 CUX1P39880 1505 aa25.52■■□□□ 1.68
CLCN2-204ENST00000434054 CLIP1P30622 1438 aa25.51■■□□□ 1.67
CLCN2-204ENST00000434054 TOP2BQ02880 1626 aa25.45■■□□□ 1.67
CLCN2-204ENST00000434054 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
CLCN2-204ENST00000434054 MYT1Q01538 1121 aa25.36■■□□□ 1.65
CLCN2-204ENST00000434054 VPS8Q8N3P4 1428 aa25.36■■□□□ 1.65
CLCN2-204ENST00000434054 RAPGEF2Q9Y4G8 1499 aa25.35■■□□□ 1.65
CLCN2-204ENST00000434054 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
CLCN2-204ENST00000434054 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
CLCN2-204ENST00000434054 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
CLCN2-204ENST00000434054 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
CLCN2-204ENST00000434054 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
CLCN2-204ENST00000434054 KANK4Q5T7N3 995 aaPredicted RBP25.23■■□□□ 1.63
CLCN2-204ENST00000434054 CUX2O14529 1486 aa25.22■■□□□ 1.63
CLCN2-204ENST00000434054 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
CLCN2-204ENST00000434054 KIF21BO75037 1637 aa25.21■■□□□ 1.63
CLCN2-204ENST00000434054 ITGAEP38570 1179 aa25.2■■□□□ 1.62
CLCN2-204ENST00000434054 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
CLCN2-204ENST00000434054 KIF27Q86VH2 1401 aa25.19■■□□□ 1.62
CLCN2-204ENST00000434054 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
CLCN2-204ENST00000434054 SUPT16HQ9Y5B9 1047 aaKnown RBP25.18■■□□□ 1.62
CLCN2-204ENST00000434054 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
CLCN2-204ENST00000434054 KIF21AQ7Z4S6 1674 aa25.15■■□□□ 1.62
CLCN2-204ENST00000434054 DNMBPQ6XZF7 1577 aa25.12■■□□□ 1.61
CLCN2-204ENST00000434054 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
CLCN2-204ENST00000434054 KCNH8Q96L42 1107 aa25.09■■□□□ 1.61
CLCN2-204ENST00000434054 ERCC6Q03468 1493 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms