Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.68□□□□□ -0.06
VRK1Q99986 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.68□□□□□ -0.06
VRK1Q99986 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.68□□□□□ -0.06
VRK1Q99986 AC018845.2-201ENST00000568326 409 ntBASIC14.68□□□□□ -0.06
VRK1Q99986 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 MTDHP5-201ENST00000598980 586 ntBASIC14.68□□□□□ -0.06
VRK1Q99986 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.68□□□□□ -0.06
VRK1Q99986 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.68□□□□□ -0.06
VRK1Q99986 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.68□□□□□ -0.06
VRK1Q99986 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.68□□□□□ -0.06
VRK1Q99986 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 AC005915.1-201ENST00000624912 2018 ntBASIC14.68□□□□□ -0.06
VRK1Q99986 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
VRK1Q99986 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.68□□□□□ -0.06
VRK1Q99986 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
VRK1Q99986 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.67□□□□□ -0.06
VRK1Q99986 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.67□□□□□ -0.06
VRK1Q99986 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.67□□□□□ -0.06
VRK1Q99986 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VRK1Q99986 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 AC005052.1-201ENST00000625181 2492 ntBASIC14.67□□□□□ -0.06
VRK1Q99986 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
VRK1Q99986 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.67□□□□□ -0.06
VRK1Q99986 AC004832.2-201ENST00000426397 482 ntBASIC14.67□□□□□ -0.06
VRK1Q99986 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.67□□□□□ -0.06
VRK1Q99986 PRSS29P-201ENST00000440800 595 ntBASIC14.67□□□□□ -0.06
VRK1Q99986 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.67□□□□□ -0.06
VRK1Q99986 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.67□□□□□ -0.06
VRK1Q99986 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.67□□□□□ -0.06
VRK1Q99986 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.67□□□□□ -0.06
VRK1Q99986 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.67□□□□□ -0.06
VRK1Q99986 AC010654.1-201ENST00000615722 808 ntBASIC14.67□□□□□ -0.06
VRK1Q99986 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.67□□□□□ -0.06
VRK1Q99986 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
VRK1Q99986 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.67□□□□□ -0.06
VRK1Q99986 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.67□□□□□ -0.06
VRK1Q99986 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VRK1Q99986 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VRK1Q99986 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.66□□□□□ -0.06
VRK1Q99986 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.66□□□□□ -0.06
VRK1Q99986 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.66□□□□□ -0.06
VRK1Q99986 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.66□□□□□ -0.06
VRK1Q99986 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VRK1Q99986 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.66□□□□□ -0.06
VRK1Q99986 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.66□□□□□ -0.06
VRK1Q99986 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
VRK1Q99986 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VRK1Q99986 RPSAP43-201ENST00000402237 625 ntBASIC14.66□□□□□ -0.06
VRK1Q99986 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.66□□□□□ -0.06
VRK1Q99986 GPX1P2-201ENST00000429271 606 ntBASIC14.66□□□□□ -0.06
VRK1Q99986 AC112482.1-201ENST00000492080 688 ntBASIC14.66□□□□□ -0.06
VRK1Q99986 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms