Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.78□□□□□ -0.04
CXCL13O43927 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CXCL13O43927 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.78□□□□□ -0.04
CXCL13O43927 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.78□□□□□ -0.04
CXCL13O43927 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CXCL13O43927 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CXCL13O43927 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.78□□□□□ -0.04
CXCL13O43927 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCL13O43927 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCL13O43927 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.78□□□□□ -0.04
CXCL13O43927 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.78□□□□□ -0.04
CXCL13O43927 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.78□□□□□ -0.04
CXCL13O43927 AC023141.5-201ENST00000458585 616 ntBASIC14.78□□□□□ -0.04
CXCL13O43927 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.78□□□□□ -0.04
CXCL13O43927 PRYP6-201ENST00000514804 343 ntBASIC14.78□□□□□ -0.04
CXCL13O43927 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.78□□□□□ -0.04
CXCL13O43927 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
CXCL13O43927 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CXCL13O43927 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CXCL13O43927 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.78□□□□□ -0.04
CXCL13O43927 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CXCL13O43927 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCL13O43927 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.78□□□□□ -0.04
CXCL13O43927 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL13O43927 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCL13O43927 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCL13O43927 AC073439.1-201ENST00000624121 1774 ntBASIC14.78□□□□□ -0.04
CXCL13O43927 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL13O43927 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL13O43927 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL13O43927 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.77□□□□□ -0.04
CXCL13O43927 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL13O43927 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL13O43927 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.77□□□□□ -0.05
CXCL13O43927 FAM58DP-201ENST00000428076 619 ntBASIC14.77□□□□□ -0.05
CXCL13O43927 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.77□□□□□ -0.05
CXCL13O43927 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CXCL13O43927 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.77□□□□□ -0.05
CXCL13O43927 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.77□□□□□ -0.05
CXCL13O43927 AP000842.3-202ENST00000569238 1080 ntBASIC14.77□□□□□ -0.05
CXCL13O43927 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.77□□□□□ -0.05
CXCL13O43927 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.77□□□□□ -0.05
CXCL13O43927 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.77□□□□□ -0.05
CXCL13O43927 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CXCL13O43927 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CXCL13O43927 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CXCL13O43927 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL13O43927 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CXCL13O43927 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CXCL13O43927 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL13O43927 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL13O43927 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL13O43927 AC009053.2-201ENST00000563701 2365 ntBASIC14.76□□□□□ -0.05
CXCL13O43927 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.76□□□□□ -0.05
CXCL13O43927 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL13O43927 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CXCL13O43927 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL13O43927 KRT18P28-201ENST00000453838 1332 ntBASIC14.76□□□□□ -0.05
CXCL13O43927 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL13O43927 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL13O43927 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL13O43927 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL13O43927 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.76□□□□□ -0.05
CXCL13O43927 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms