Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 CFL2-205ENST00000555765 632 ntTSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 AC116407.2-201ENST00000613639 860 ntBASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 LINC01451-201ENST00000623792 534 ntBASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 HLA-DQB2-231ENST00000435145 2026 ntBASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 GCK-202ENST00000345378 2421 ntTSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC9.15□□□□□ -0.95
CHKB-CPT1BH3BT56 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 APP-205ENST00000358918 2366 ntTSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CHKB-CPT1BH3BT56 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms