RNA–Protein interactions for RNA: ENST00000310833.11

CD34-201, Transcript of CD34 molecule, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CD34, Length 8,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD34-201ENST00000310833 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
CD34-201ENST00000310833 DCAF8L2P0C7V8 631 aa17.87■□□□□ 0.45
CD34-201ENST00000310833 MYT1Q01538 1121 aa17.84■□□□□ 0.45
CD34-201ENST00000310833 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
CD34-201ENST00000310833 ERICH6Q7L0X2 663 aa17.45■□□□□ 0.38
CD34-201ENST00000310833 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
CD34-201ENST00000310833 APLP2Q06481 763 aa17.34■□□□□ 0.37
CD34-201ENST00000310833 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
CD34-201ENST00000310833 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
CD34-201ENST00000310833 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
CD34-201ENST00000310833 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
CD34-201ENST00000310833 NEFLP07196 543 aa16.96■□□□□ 0.3
CD34-201ENST00000310833 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
CD34-201ENST00000310833 DAXXQ9UER7 740 aaPredicted RBP16.7■□□□□ 0.26
CD34-201ENST00000310833 TTBK1Q5TCY1 1321 aaPredicted RBP16.59■□□□□ 0.25
CD34-201ENST00000310833 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
CD34-201ENST00000310833 PCGF6Q9BYE7 350 aa16.47■□□□□ 0.23
CD34-201ENST00000310833 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
CD34-201ENST00000310833 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
CD34-201ENST00000310833 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
CD34-201ENST00000310833 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
CD34-201ENST00000310833 UBTFP17480 764 aaKnown RBP16.08■□□□□ 0.17
CD34-201ENST00000310833 ATP1B4Q9UN42 357 aaPredicted RBP16.08■□□□□ 0.16
CD34-201ENST00000310833 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
CD34-201ENST00000310833 CLSPNQ9HAW4 1339 aa15.92■□□□□ 0.14
CD34-201ENST00000310833 GLIPR1L2Q4G1C9 344 aa15.83■□□□□ 0.13
CD34-201ENST00000310833 RANGAP1P46060 587 aaPredicted RBP15.81■□□□□ 0.12
CD34-201ENST00000310833 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
CD34-201ENST00000310833 MYT1LQ9UL68 1186 aa15.79■□□□□ 0.12
CD34-201ENST00000310833 HRCP23327 699 aa15.78■□□□□ 0.12
CD34-201ENST00000310833 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.11
CD34-201ENST00000310833 ANP32BQ92688 251 aaKnown RBP15.71■□□□□ 0.11
CD34-201ENST00000310833 NEFMP07197 916 aa15.66■□□□□ 0.1
CD34-201ENST00000310833 POLR3GLQ9BT43 218 aa15.63■□□□□ 0.09
CD34-201ENST00000310833 DIEXFQ68CQ4 756 aaKnown RBP15.59■□□□□ 0.09
CD34-201ENST00000310833 ANP32AP39687 249 aaKnown RBP15.57■□□□□ 0.08
CD34-201ENST00000310833 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
CD34-201ENST00000310833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
CD34-201ENST00000310833 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
CD34-201ENST00000310833 ANP32CO43423 234 aa15.49■□□□□ 0.07
CD34-201ENST00000310833 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
CD34-201ENST00000310833 UPF2Q9HAU5 1272 aaKnown RBP15.41■□□□□ 0.06
CD34-201ENST00000310833 ITGAEP38570 1179 aa15.39■□□□□ 0.05
CD34-201ENST00000310833 HSP90AA1P07900 732 aaKnown RBP15.3■□□□□ 0.04
CD34-201ENST00000310833 ANP32EQ9BTT0 268 aa15.28■□□□□ 0.04
CD34-201ENST00000310833 TNNT2P45379 298 aaPredicted RBP15.25■□□□□ 0.03
CD34-201ENST00000310833 EIF5BO60841 1220 aaKnown RBP15.23■□□□□ 0.03
CD34-201ENST00000310833 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
CD34-201ENST00000310833 CDK11BP21127 795 aaKnown RBP15.2■□□□□ 0.02
CD34-201ENST00000310833 PPARGC1BQ86YN6 1023 aaKnown RBP15.2■□□□□ 0.02
CD34-201ENST00000310833 TRIM52Q96A61 297 aa15.18■□□□□ 0.02
CD34-201ENST00000310833 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
CD34-201ENST00000310833 CNGB1Q14028 1251 aaPredicted RBP15.15■□□□□ 0.02
CD34-201ENST00000310833 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.12■□□□□ 0.01
CD34-201ENST00000310833 TRIM44Q96DX7 344 aaPredicted RBP15.08■□□□□ 0
CD34-201ENST00000310833 SLC24A1O60721 1099 aa15.05■□□□□ 0
CD34-201ENST00000310833 CHIC1Q5VXU3 224 aa15.05■□□□□ 0
CD34-201ENST00000310833 ACIN1Q9UKV3 1341 aaKnown RBP15.05■□□□□ -0
CD34-201ENST00000310833 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
CD34-201ENST00000310833 BCANQ96GW7 911 aa15.02□□□□□ -0.01
CD34-201ENST00000310833 NEUROD1Q13562 356 aa15.02□□□□□ -0.01
CD34-201ENST00000310833 BECN1Q14457 450 aa15.01□□□□□ -0.01
CD34-201ENST00000310833 GOLGA6L22H0YM25 854 aa14.98□□□□□ -0.01
CD34-201ENST00000310833 NCLP19338 710 aaKnown RBP14.97□□□□□ -0.01
CD34-201ENST00000310833 MYH16Q9H6N6 1097 aa14.95□□□□□ -0.02
CD34-201ENST00000310833 NPM2Q86SE8 214 aaKnown RBP14.94□□□□□ -0.02
CD34-201ENST00000310833 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
CD34-201ENST00000310833 LOC105371045A0A1W2PR82 267 aa14.9□□□□□ -0.02
CD34-201ENST00000310833 ERICH6BQ5W0A0 696 aa14.88□□□□□ -0.03
CD34-201ENST00000310833 TONSLQ96HA7 1378 aa14.87□□□□□ -0.03
CD34-201ENST00000310833 ZRSR1Q15695 479 aaKnown RBP14.86□□□□□ -0.03
CD34-201ENST00000310833 GOLGA6L6A8MZA4 724 aa14.85□□□□□ -0.03
CD34-201ENST00000310833 CCDC136Q96JN2 1154 aa14.85□□□□□ -0.03
CD34-201ENST00000310833 NRDCO43847 1150 aa14.82□□□□□ -0.04
CD34-201ENST00000310833 CASC1Q6TDU7 716 aa14.81□□□□□ -0.04
CD34-201ENST00000310833 FKBP8Q14318 412 aa14.8□□□□□ -0.04
CD34-201ENST00000310833 L1TD1Q5T7N2 865 aaKnown RBP14.8□□□□□ -0.04
CD34-201ENST00000310833 ESF1Q9H501 851 aaKnown RBP14.78□□□□□ -0.04
CD34-201ENST00000310833 WDR43Q15061 677 aaKnown RBP eCLIP14.77□□□□□ -0.05
CD34-201ENST00000310833 BCL11AQ9H165 835 aa14.77□□□□□ -0.05
CD34-201ENST00000310833 DCAF1Q9Y4B6 1507 aa14.76□□□□□ -0.05
CD34-201ENST00000310833 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
CD34-201ENST00000310833 PPM1GO15355 546 aaPredicted RBP14.74□□□□□ -0.05
CD34-201ENST00000310833 HNRNPUQ00839 825 aaKnown RBP eCLIP14.74□□□□□ -0.05
CD34-201ENST00000310833 CHMP4BQ9H444 224 aaKnown RBP14.73□□□□□ -0.05
CD34-201ENST00000310833 CHAF1AQ13111 956 aaPredicted RBP14.72□□□□□ -0.05
CD34-201ENST00000310833 PTMAP06454 111 aaKnown RBP14.71□□□□□ -0.05
CD34-201ENST00000310833 CFAP44Q96MT7 982 aa14.7□□□□□ -0.06
CD34-201ENST00000310833 NBR1Q14596 966 aa14.69□□□□□ -0.06
CD34-201ENST00000310833 DNTTIP2Q5QJE6 756 aaKnown RBP14.69□□□□□ -0.06
CD34-201ENST00000310833 PTMSP20962 102 aa14.66□□□□□ -0.06
CD34-201ENST00000310833 USP35Q9P2H5 1018 aa14.66□□□□□ -0.06
CD34-201ENST00000310833 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
CD34-201ENST00000310833 MS4A1P11836 297 aa14.6□□□□□ -0.07
CD34-201ENST00000310833 CDCA8Q53HL2 280 aa14.58□□□□□ -0.08
CD34-201ENST00000310833 CCDC180Q9P1Z9 1646 aa14.58□□□□□ -0.08
CD34-201ENST00000310833 ARID4BQ4LE39 1312 aaPredicted RBP14.57□□□□□ -0.08
CD34-201ENST00000310833 FAM9BQ8IZU0 186 aa14.56□□□□□ -0.08
CD34-201ENST00000310833 NAP1L5Q96NT1 182 aaPredicted RBP14.53□□□□□ -0.08
CD34-201ENST00000310833 CFAP53Q96M91 514 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms