RNA–Protein interactions for RNA: ENST00000614341.4

USH1G-202, Transcript of USH1 protein network component sans, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH1G, Length 3,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1G-202ENST00000614341 NISCHQ9Y2I1 1504 aa27.24■■□□□ 1.95
USH1G-202ENST00000614341 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
USH1G-202ENST00000614341 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
USH1G-202ENST00000614341 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
USH1G-202ENST00000614341 PELP1Q8IZL8 1130 aaKnown RBP23.09■■□□□ 1.29
USH1G-202ENST00000614341 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
USH1G-202ENST00000614341 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
USH1G-202ENST00000614341 MYO15BQ96JP2 1530 aa22.8■■□□□ 1.24
USH1G-202ENST00000614341 CCDC180Q9P1Z9 1646 aa22.76■■□□□ 1.23
USH1G-202ENST00000614341 PCGF6Q9BYE7 350 aa22.63■■□□□ 1.21
USH1G-202ENST00000614341 MYT1Q01538 1121 aa22.54■■□□□ 1.2
USH1G-202ENST00000614341 HRCP23327 699 aa22.53■■□□□ 1.2
USH1G-202ENST00000614341 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
USH1G-202ENST00000614341 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
USH1G-202ENST00000614341 DCAF1Q9Y4B6 1507 aa22.04■■□□□ 1.12
USH1G-202ENST00000614341 EHMT2Q96KQ7 1210 aa22.04■■□□□ 1.12
USH1G-202ENST00000614341 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
USH1G-202ENST00000614341 TRIM26Q12899 539 aaPredicted RBP21.88■■□□□ 1.09
USH1G-202ENST00000614341 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
USH1G-202ENST00000614341 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
USH1G-202ENST00000614341 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
USH1G-202ENST00000614341 ABCC9O60706 1549 aa21.74■■□□□ 1.07
USH1G-202ENST00000614341 RB1CC1Q8TDY2 1594 aa21.59■■□□□ 1.05
USH1G-202ENST00000614341 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
USH1G-202ENST00000614341 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
USH1G-202ENST00000614341 TTBK1Q5TCY1 1321 aaPredicted RBP21.41■■□□□ 1.02
USH1G-202ENST00000614341 ZEB1P37275 1124 aaPredicted RBP21.38■■□□□ 1.01
USH1G-202ENST00000614341 MROH2BQ7Z745 1585 aa21.32■■□□□ 1
USH1G-202ENST00000614341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
USH1G-202ENST00000614341 WIZO95785 1651 aa21.21■□□□□ 0.99
USH1G-202ENST00000614341 CCER1Q8TC90 406 aaPredicted RBP21.13■□□□□ 0.97
USH1G-202ENST00000614341 NACADO15069 1562 aa21.13■□□□□ 0.97
USH1G-202ENST00000614341 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
USH1G-202ENST00000614341 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
USH1G-202ENST00000614341 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.94
USH1G-202ENST00000614341 CCDC88BA6NC98 1476 aa20.89■□□□□ 0.94
USH1G-202ENST00000614341 BCL11AQ9H165 835 aa20.89■□□□□ 0.94
USH1G-202ENST00000614341 PRKCSHP14314 528 aaPredicted RBP20.86■□□□□ 0.93
USH1G-202ENST00000614341 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
USH1G-202ENST00000614341 SOGA1O94964 1423 aa20.83■□□□□ 0.92
USH1G-202ENST00000614341 CEP162Q5TB80 1403 aa20.77■□□□□ 0.92
USH1G-202ENST00000614341 DIEXFQ68CQ4 756 aaKnown RBP20.76■□□□□ 0.91
USH1G-202ENST00000614341 ACIN1Q9UKV3 1341 aaKnown RBP20.75■□□□□ 0.91
USH1G-202ENST00000614341 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
USH1G-202ENST00000614341 RANGAP1P46060 587 aaPredicted RBP20.74■□□□□ 0.91
USH1G-202ENST00000614341 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
USH1G-202ENST00000614341 NEUROD1Q13562 356 aa20.73■□□□□ 0.91
USH1G-202ENST00000614341 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
USH1G-202ENST00000614341 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
USH1G-202ENST00000614341 CENPBP07199 599 aaPredicted RBP20.69■□□□□ 0.9
USH1G-202ENST00000614341 GTF3C3Q9Y5Q9 886 aa20.69■□□□□ 0.9
USH1G-202ENST00000614341 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
USH1G-202ENST00000614341 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
USH1G-202ENST00000614341 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
USH1G-202ENST00000614341 TNIKQ9UKE5 1360 aa20.61■□□□□ 0.89
USH1G-202ENST00000614341 YTHDC1Q96MU7 727 aaKnown RBP20.57■□□□□ 0.88
USH1G-202ENST00000614341 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
USH1G-202ENST00000614341 ERICH6Q7L0X2 663 aa20.48■□□□□ 0.87
USH1G-202ENST00000614341 UNC13AQ9UPW8 1703 aa20.48■□□□□ 0.87
USH1G-202ENST00000614341 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
USH1G-202ENST00000614341 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
USH1G-202ENST00000614341 APLP2Q06481 763 aa20.43■□□□□ 0.86
USH1G-202ENST00000614341 EEA1Q15075 1411 aa20.43■□□□□ 0.86
USH1G-202ENST00000614341 CLIP1P30622 1438 aa20.35■□□□□ 0.85
USH1G-202ENST00000614341 MIER1Q8N108 512 aa20.32■□□□□ 0.84
USH1G-202ENST00000614341 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
USH1G-202ENST00000614341 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
USH1G-202ENST00000614341 BICRAQ9NZM4 1560 aa20.26■□□□□ 0.83
USH1G-202ENST00000614341 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
USH1G-202ENST00000614341 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
USH1G-202ENST00000614341 VPS8Q8N3P4 1428 aa20.19■□□□□ 0.82
USH1G-202ENST00000614341 ANP32EQ9BTT0 268 aa20.18■□□□□ 0.82
USH1G-202ENST00000614341 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
USH1G-202ENST00000614341 ITGAEP38570 1179 aa20.13■□□□□ 0.81
USH1G-202ENST00000614341 KIF21BO75037 1637 aa20.11■□□□□ 0.81
USH1G-202ENST00000614341 KANK4Q5T7N3 995 aaPredicted RBP20.09■□□□□ 0.81
USH1G-202ENST00000614341 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
USH1G-202ENST00000614341 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
USH1G-202ENST00000614341 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
USH1G-202ENST00000614341 ARAP1Q96P48 1450 aa19.89■□□□□ 0.77
USH1G-202ENST00000614341 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
USH1G-202ENST00000614341 PRXQ9BXM0 1461 aa19.84■□□□□ 0.77
USH1G-202ENST00000614341 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
USH1G-202ENST00000614341 P3H3Q8IVL6 736 aa19.8■□□□□ 0.76
USH1G-202ENST00000614341 CUX1P39880 1505 aa19.78■□□□□ 0.76
USH1G-202ENST00000614341 CCNB3Q8WWL7 1395 aa19.75■□□□□ 0.75
USH1G-202ENST00000614341 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
USH1G-202ENST00000614341 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
USH1G-202ENST00000614341 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
USH1G-202ENST00000614341 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
USH1G-202ENST00000614341 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
USH1G-202ENST00000614341 ARHGAP35Q9NRY4 1499 aa19.7■□□□□ 0.74
USH1G-202ENST00000614341 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
USH1G-202ENST00000614341 SIN3AQ96ST3 1273 aa19.67■□□□□ 0.74
USH1G-202ENST00000614341 SUPT16HQ9Y5B9 1047 aaKnown RBP19.67■□□□□ 0.74
USH1G-202ENST00000614341 CUX2O14529 1486 aa19.66■□□□□ 0.74
USH1G-202ENST00000614341 HIRIP3Q9BW71 556 aaPredicted RBP19.66■□□□□ 0.74
USH1G-202ENST00000614341 RAB3GAP2Q9H2M9 1393 aa19.66■□□□□ 0.74
USH1G-202ENST00000614341 NCAPD3P42695 1498 aa19.63■□□□□ 0.73
USH1G-202ENST00000614341 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms