RNA–Protein interactions for RNA: ENST00000481070.1

KCNMA1-220, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-220ENST00000481070 NISCHQ9Y2I1 1504 aa45.2■■■■■ 4.83
KCNMA1-220ENST00000481070 CCDC180Q9P1Z9 1646 aa39.78■■■■□ 3.96
KCNMA1-220ENST00000481070 ABCC9O60706 1549 aa39.6■■■■□ 3.93
KCNMA1-220ENST00000481070 DNAJC5BQ9UF47 199 aa37.95■■■■□ 3.67
KCNMA1-220ENST00000481070 ZCCHC6Q5VYS8 1495 aaKnown RBP37.78■■■■□ 3.64
KCNMA1-220ENST00000481070 DCAF8L2P0C7V8 631 aa37.75■■■■□ 3.63
KCNMA1-220ENST00000481070 RB1CC1Q8TDY2 1594 aa37.37■■■■□ 3.57
KCNMA1-220ENST00000481070 DCAF1Q9Y4B6 1507 aa37.3■■■■□ 3.56
KCNMA1-220ENST00000481070 NACADO15069 1562 aa37.25■■■■□ 3.55
KCNMA1-220ENST00000481070 MYO15BQ96JP2 1530 aa37.15■■■■□ 3.54
KCNMA1-220ENST00000481070 UNC13AQ9UPW8 1703 aa36.67■■■■□ 3.46
KCNMA1-220ENST00000481070 PABPN1Q86U42 306 aaKnown RBP eCLIP36.59■■■■□ 3.45
KCNMA1-220ENST00000481070 SCRIBQ14160 1630 aa36.56■■■■□ 3.44
KCNMA1-220ENST00000481070 SHROOM4Q9ULL8 1493 aa36.42■■■■□ 3.42
KCNMA1-220ENST00000481070 BICRAQ9NZM4 1560 aa36.33■■■■□ 3.41
KCNMA1-220ENST00000481070 CC2D2AQ9P2K1 1620 aa35.83■■■■□ 3.33
KCNMA1-220ENST00000481070 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
KCNMA1-220ENST00000481070 DNAJC5Q9H3Z4 198 aa35.62■■■■□ 3.29
KCNMA1-220ENST00000481070 EIF4G1Q04637 1599 aaKnown RBP35.51■■■■□ 3.27
KCNMA1-220ENST00000481070 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
KCNMA1-220ENST00000481070 SMARCA4P51532 1647 aa34.93■■■■□ 3.18
KCNMA1-220ENST00000481070 MROH2BQ7Z745 1585 aa34.91■■■■□ 3.18
KCNMA1-220ENST00000481070 RSF1Q96T23 1441 aaPredicted RBP34.75■■■■□ 3.15
KCNMA1-220ENST00000481070 CUX2O14529 1486 aa34.65■■■■□ 3.14
KCNMA1-220ENST00000481070 SUPT5HO00267 1087 aaKnown RBP34.62■■■■□ 3.13
KCNMA1-220ENST00000481070 WIZO95785 1651 aa34.61■■■■□ 3.13
KCNMA1-220ENST00000481070 ATAD2BQ9ULI0 1458 aa34.56■■■■□ 3.12
KCNMA1-220ENST00000481070 SMARCA2P51531 1590 aa34.5■■■■□ 3.11
KCNMA1-220ENST00000481070 PEG3Q9GZU2 1588 aa34.47■■■■□ 3.11
KCNMA1-220ENST00000481070 NCAPD3P42695 1498 aa34.37■■■■□ 3.09
KCNMA1-220ENST00000481070 BAZ1BQ9UIG0 1483 aaKnown RBP34.34■■■■□ 3.09
KCNMA1-220ENST00000481070 ERCC6Q03468 1493 aa34.28■■■■□ 3.08
KCNMA1-220ENST00000481070 HMGXB3Q12766 1538 aa34.25■■■■□ 3.07
KCNMA1-220ENST00000481070 TOP2AP11388 1531 aaKnown RBP34.19■■■■□ 3.06
KCNMA1-220ENST00000481070 CCDC88BA6NC98 1476 aa33.84■■■■□ 3.01
KCNMA1-220ENST00000481070 THOC2Q8NI27 1593 aaKnown RBP33.76■■■□□ 2.99
KCNMA1-220ENST00000481070 NESP48681 1621 aa33.75■■■□□ 2.99
KCNMA1-220ENST00000481070 TRIM41Q8WV44 630 aa33.57■■■□□ 2.96
KCNMA1-220ENST00000481070 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
KCNMA1-220ENST00000481070 CADPSQ9ULU8 1353 aa33.47■■■□□ 2.95
KCNMA1-220ENST00000481070 KIF21AQ7Z4S6 1674 aa33.43■■■□□ 2.94
KCNMA1-220ENST00000481070 CFTRP13569 1480 aa33.38■■■□□ 2.93
KCNMA1-220ENST00000481070 PDS5BQ9NTI5 1447 aa33.19■■■□□ 2.9
KCNMA1-220ENST00000481070 PRDM2Q13029 1718 aa33.19■■■□□ 2.9
KCNMA1-220ENST00000481070 FANCD2Q9BXW9 1451 aa33.12■■■□□ 2.89
KCNMA1-220ENST00000481070 WDR62O43379 1518 aa33.02■■■□□ 2.88
KCNMA1-220ENST00000481070 MRC2Q9UBG0 1479 aa33.01■■■□□ 2.88
KCNMA1-220ENST00000481070 CEP164Q9UPV0 1460 aa32.99■■■□□ 2.87
KCNMA1-220ENST00000481070 ABCC8Q09428 1581 aa32.9■■■□□ 2.86
KCNMA1-220ENST00000481070 URB2Q14146 1524 aaKnown RBP32.75■■■□□ 2.83
KCNMA1-220ENST00000481070 WRNQ14191 1432 aaPredicted RBP eCLIP32.75■■■□□ 2.83
KCNMA1-220ENST00000481070 OSCARQ8IYS5 282 aa32.72■■■□□ 2.83
KCNMA1-220ENST00000481070 CUX1P39880 1505 aa32.7■■■□□ 2.83
KCNMA1-220ENST00000481070 TOPBP1Q92547 1522 aa32.66■■■□□ 2.82
KCNMA1-220ENST00000481070 SYNJ1O43426 1573 aa32.66■■■□□ 2.82
KCNMA1-220ENST00000481070 DNMBPQ6XZF7 1577 aa32.65■■■□□ 2.82
KCNMA1-220ENST00000481070 CHIC1Q5VXU3 224 aa32.64■■■□□ 2.82
KCNMA1-220ENST00000481070 RIMBP3CA6NJZ7 1639 aa32.6■■■□□ 2.81
KCNMA1-220ENST00000481070 RIMBP3BA6NNM3 1639 aa32.6■■■□□ 2.81
KCNMA1-220ENST00000481070 RIMBP3Q9UFD9 1639 aa32.6■■■□□ 2.81
KCNMA1-220ENST00000481070 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
KCNMA1-220ENST00000481070 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
KCNMA1-220ENST00000481070 FGD5Q6ZNL6 1462 aa32.48■■■□□ 2.79
KCNMA1-220ENST00000481070 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
KCNMA1-220ENST00000481070 RAD54L2Q9Y4B4 1467 aa32.36■■■□□ 2.77
KCNMA1-220ENST00000481070 ARHGEF11O15085 1522 aa32.36■■■□□ 2.77
KCNMA1-220ENST00000481070 SOGA1O94964 1423 aa32.34■■■□□ 2.77
KCNMA1-220ENST00000481070 IFT140Q96RY7 1462 aa32.23■■■□□ 2.75
KCNMA1-220ENST00000481070 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
KCNMA1-220ENST00000481070 WDR97A6NE52 1622 aa32.12■■■□□ 2.73
KCNMA1-220ENST00000481070 ABCA10Q8WWZ4 1543 aa32.12■■■□□ 2.73
KCNMA1-220ENST00000481070 ZNF608Q9ULD9 1512 aaPredicted RBP32.12■■■□□ 2.73
KCNMA1-220ENST00000481070 TDRD9Q8NDG6 1382 aaKnown RBP32.12■■■□□ 2.73
KCNMA1-220ENST00000481070 AQRO60306 1485 aaKnown RBP eCLIP32.05■■■□□ 2.72
KCNMA1-220ENST00000481070 RUSC2Q8N2Y8 1516 aa32.05■■■□□ 2.72
KCNMA1-220ENST00000481070 FAM9AQ8IZU1 332 aaPredicted RBP32.03■■■□□ 2.72
KCNMA1-220ENST00000481070 CYB5RLQ6IPT4 315 aa31.99■■■□□ 2.71
KCNMA1-220ENST00000481070 KIF27Q86VH2 1401 aa31.99■■■□□ 2.71
KCNMA1-220ENST00000481070 EIF4G3O43432 1585 aaKnown RBP31.98■■■□□ 2.71
KCNMA1-220ENST00000481070 GAPVD1Q14C86 1478 aa31.96■■■□□ 2.71
KCNMA1-220ENST00000481070 ARAP1Q96P48 1450 aa31.96■■■□□ 2.71
KCNMA1-220ENST00000481070 CHD1O14646 1710 aa31.95■■■□□ 2.71
KCNMA1-220ENST00000481070 ABCA5Q8WWZ7 1642 aa31.95■■■□□ 2.71
KCNMA1-220ENST00000481070 TRHP20396 242 aaPredicted RBP31.94■■■□□ 2.7
KCNMA1-220ENST00000481070 PBRM1Q86U86 1689 aa31.86■■■□□ 2.69
KCNMA1-220ENST00000481070 GRIN2BQ13224 1484 aa31.82■■■□□ 2.68
KCNMA1-220ENST00000481070 IGF1RP08069 1367 aa31.79■■■□□ 2.68
KCNMA1-220ENST00000481070 EEA1Q15075 1411 aa31.78■■■□□ 2.68
KCNMA1-220ENST00000481070 AEBP2Q6ZN18 517 aaPredicted RBP31.77■■■□□ 2.68
KCNMA1-220ENST00000481070 CSRNP3Q8WYN3 585 aa31.76■■■□□ 2.67
KCNMA1-220ENST00000481070 SNAPC4Q5SXM2 1469 aa31.74■■■□□ 2.67
KCNMA1-220ENST00000481070 ERICH3Q5RHP9 1530 aa31.74■■■□□ 2.67
KCNMA1-220ENST00000481070 EHMT2Q96KQ7 1210 aa31.67■■■□□ 2.66
KCNMA1-220ENST00000481070 CARMIL1Q5VZK9 1371 aa31.63■■■□□ 2.65
KCNMA1-220ENST00000481070 FBLN2P98095 1184 aa31.62■■■□□ 2.65
KCNMA1-220ENST00000481070 MAGI1Q96QZ7 1491 aaPredicted RBP31.62■■■□□ 2.65
KCNMA1-220ENST00000481070 ADAMTS12P58397 1594 aa31.61■■■□□ 2.65
KCNMA1-220ENST00000481070 CUL7Q14999 1698 aa31.6■■■□□ 2.65
KCNMA1-220ENST00000481070 FHAD1B1AJZ9 1412 aa31.58■■■□□ 2.65
KCNMA1-220ENST00000481070 CHMP7Q8WUX9 453 aaPredicted RBP31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms