Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 TOP3BP1-201ENST00000420768 1380 ntBASIC14.25□□□□□ -0.13
NICN1Q9BSH3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 AC099336.1-202ENST00000602961 463 ntBASIC14.25□□□□□ -0.13
NICN1Q9BSH3 AC064862.7-201ENST00000604520 867 ntBASIC14.25□□□□□ -0.13
NICN1Q9BSH3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 AC007326.2-201ENST00000624224 7579 ntBASIC14.25□□□□□ -0.13
NICN1Q9BSH3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 MIR5100-201ENST00000579544 119 ntBASIC14.24□□□□□ -0.13
NICN1Q9BSH3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.24□□□□□ -0.13
NICN1Q9BSH3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.24□□□□□ -0.13
NICN1Q9BSH3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms