RNA–Protein interactions for RNA: ENST00000594943.1

ZNF549-203, Transcript of zinc finger protein 549, humanhuman

TSL 4 BASIC

Gene ZNF549, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-203ENST00000594943 NISCHQ9Y2I1 1504 aa44.45■■■■■ 4.71
ZNF549-203ENST00000594943 CCDC180Q9P1Z9 1646 aa39.74■■■■□ 3.95
ZNF549-203ENST00000594943 ABCC9O60706 1549 aa39.24■■■■□ 3.87
ZNF549-203ENST00000594943 RB1CC1Q8TDY2 1594 aa37.6■■■■□ 3.61
ZNF549-203ENST00000594943 NACADO15069 1562 aa37.45■■■■□ 3.59
ZNF549-203ENST00000594943 DCAF8L2P0C7V8 631 aa37.27■■■■□ 3.56
ZNF549-203ENST00000594943 MYO15BQ96JP2 1530 aa37.09■■■■□ 3.53
ZNF549-203ENST00000594943 ZCCHC6Q5VYS8 1495 aaKnown RBP36.95■■■■□ 3.51
ZNF549-203ENST00000594943 DCAF1Q9Y4B6 1507 aa36.77■■■■□ 3.48
ZNF549-203ENST00000594943 UNC13AQ9UPW8 1703 aa36.7■■■■□ 3.47
ZNF549-203ENST00000594943 PABPN1Q86U42 306 aaKnown RBP eCLIP36.56■■■■□ 3.44
ZNF549-203ENST00000594943 BICRAQ9NZM4 1560 aa36.44■■■■□ 3.42
ZNF549-203ENST00000594943 DNAJC5BQ9UF47 199 aa36.32■■■■□ 3.4
ZNF549-203ENST00000594943 SCRIBQ14160 1630 aa36.21■■■■□ 3.39
ZNF549-203ENST00000594943 SHROOM4Q9ULL8 1493 aa36.09■■■■□ 3.37
ZNF549-203ENST00000594943 EIF4G1Q04637 1599 aaKnown RBP35.54■■■■□ 3.28
ZNF549-203ENST00000594943 CC2D2AQ9P2K1 1620 aa35.49■■■■□ 3.27
ZNF549-203ENST00000594943 CECR2Q9BXF3 1484 aa35.33■■■■□ 3.25
ZNF549-203ENST00000594943 SMARCA4P51532 1647 aa34.59■■■■□ 3.13
ZNF549-203ENST00000594943 NCAPD3P42695 1498 aa34.53■■■■□ 3.12
ZNF549-203ENST00000594943 BAZ1AQ9NRL2 1556 aaPredicted RBP34.5■■■■□ 3.11
ZNF549-203ENST00000594943 ATAD2BQ9ULI0 1458 aa34.49■■■■□ 3.11
ZNF549-203ENST00000594943 SMARCA2P51531 1590 aa34.47■■■■□ 3.11
ZNF549-203ENST00000594943 HMGXB3Q12766 1538 aa34.36■■■■□ 3.09
ZNF549-203ENST00000594943 PEG3Q9GZU2 1588 aa34.26■■■■□ 3.07
ZNF549-203ENST00000594943 MROH2BQ7Z745 1585 aa34.23■■■■□ 3.07
ZNF549-203ENST00000594943 BAZ1BQ9UIG0 1483 aaKnown RBP34.21■■■■□ 3.07
ZNF549-203ENST00000594943 ERCC6Q03468 1493 aa33.9■■■■□ 3.02
ZNF549-203ENST00000594943 WIZO95785 1651 aa33.84■■■■□ 3.01
ZNF549-203ENST00000594943 NESP48681 1621 aa33.82■■■■□ 3.01
ZNF549-203ENST00000594943 LAMC3Q9Y6N6 1575 aa33.72■■■□□ 2.99
ZNF549-203ENST00000594943 CUX2O14529 1486 aa33.69■■■□□ 2.98
ZNF549-203ENST00000594943 RSF1Q96T23 1441 aaPredicted RBP33.68■■■□□ 2.98
ZNF549-203ENST00000594943 CADPSQ9ULU8 1353 aa33.5■■■□□ 2.95
ZNF549-203ENST00000594943 TOP2AP11388 1531 aaKnown RBP33.5■■■□□ 2.95
ZNF549-203ENST00000594943 PDS5BQ9NTI5 1447 aa33.5■■■□□ 2.95
ZNF549-203ENST00000594943 THOC2Q8NI27 1593 aaKnown RBP33.44■■■□□ 2.94
ZNF549-203ENST00000594943 KIF21AQ7Z4S6 1674 aa33.43■■■□□ 2.94
ZNF549-203ENST00000594943 CFTRP13569 1480 aa33.23■■■□□ 2.91
ZNF549-203ENST00000594943 MRC2Q9UBG0 1479 aa33.19■■■□□ 2.9
ZNF549-203ENST00000594943 CEP164Q9UPV0 1460 aa33.16■■■□□ 2.9
ZNF549-203ENST00000594943 FANCD2Q9BXW9 1451 aa33.14■■■□□ 2.9
ZNF549-203ENST00000594943 WDR62O43379 1518 aa33.1■■■□□ 2.89
ZNF549-203ENST00000594943 DNAJC5Q9H3Z4 198 aa33.08■■■□□ 2.89
ZNF549-203ENST00000594943 CCDC88BA6NC98 1476 aa33.06■■■□□ 2.88
ZNF549-203ENST00000594943 PRDM2Q13029 1718 aa32.97■■■□□ 2.87
ZNF549-203ENST00000594943 URB2Q14146 1524 aaKnown RBP32.82■■■□□ 2.84
ZNF549-203ENST00000594943 TOPBP1Q92547 1522 aa32.56■■■□□ 2.8
ZNF549-203ENST00000594943 ABCC8Q09428 1581 aa32.55■■■□□ 2.8
ZNF549-203ENST00000594943 DNMBPQ6XZF7 1577 aa32.5■■■□□ 2.79
ZNF549-203ENST00000594943 SUPT5HO00267 1087 aaKnown RBP32.5■■■□□ 2.79
ZNF549-203ENST00000594943 IFT140Q96RY7 1462 aa32.48■■■□□ 2.79
ZNF549-203ENST00000594943 ZNF608Q9ULD9 1512 aaPredicted RBP32.33■■■□□ 2.77
ZNF549-203ENST00000594943 POLA1P09884 1462 aaPredicted RBP32.26■■■□□ 2.75
ZNF549-203ENST00000594943 TARBP1Q13395 1621 aaKnown RBP32.23■■■□□ 2.75
ZNF549-203ENST00000594943 EIF4G3O43432 1585 aaKnown RBP32.23■■■□□ 2.75
ZNF549-203ENST00000594943 OSCARQ8IYS5 282 aa32.17■■■□□ 2.74
ZNF549-203ENST00000594943 CUX1P39880 1505 aa32.15■■■□□ 2.74
ZNF549-203ENST00000594943 FGD5Q6ZNL6 1462 aa32.12■■■□□ 2.73
ZNF549-203ENST00000594943 SOGA1O94964 1423 aa32.1■■■□□ 2.73
ZNF549-203ENST00000594943 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
ZNF549-203ENST00000594943 AQRO60306 1485 aaKnown RBP eCLIP32.09■■■□□ 2.73
ZNF549-203ENST00000594943 WDR97A6NE52 1622 aa32■■■□□ 2.71
ZNF549-203ENST00000594943 TDRD9Q8NDG6 1382 aaKnown RBP31.96■■■□□ 2.71
ZNF549-203ENST00000594943 CHD1O14646 1710 aa31.89■■■□□ 2.69
ZNF549-203ENST00000594943 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
ZNF549-203ENST00000594943 SNAPC4Q5SXM2 1469 aa31.82■■■□□ 2.68
ZNF549-203ENST00000594943 GRIN2BQ13224 1484 aa31.8■■■□□ 2.68
ZNF549-203ENST00000594943 WRNQ14191 1432 aaPredicted RBP eCLIP31.8■■■□□ 2.68
ZNF549-203ENST00000594943 FBLN2P98095 1184 aa31.79■■■□□ 2.68
ZNF549-203ENST00000594943 ABCA10Q8WWZ4 1543 aa31.79■■■□□ 2.68
ZNF549-203ENST00000594943 TOP2BQ02880 1626 aa31.78■■■□□ 2.68
ZNF549-203ENST00000594943 BIVM-ERCC5R4GMW8 1640 aa31.78■■■□□ 2.68
ZNF549-203ENST00000594943 MAGI1Q96QZ7 1491 aaPredicted RBP31.78■■■□□ 2.68
ZNF549-203ENST00000594943 GAPVD1Q14C86 1478 aa31.74■■■□□ 2.67
ZNF549-203ENST00000594943 SYNJ1O43426 1573 aa31.73■■■□□ 2.67
ZNF549-203ENST00000594943 RIMBP3CA6NJZ7 1639 aa31.73■■■□□ 2.67
ZNF549-203ENST00000594943 RIMBP3BA6NNM3 1639 aa31.73■■■□□ 2.67
ZNF549-203ENST00000594943 RIMBP3Q9UFD9 1639 aa31.73■■■□□ 2.67
ZNF549-203ENST00000594943 ABCA5Q8WWZ7 1642 aa31.71■■■□□ 2.67
ZNF549-203ENST00000594943 PBRM1Q86U86 1689 aa31.71■■■□□ 2.67
ZNF549-203ENST00000594943 ARHGEF11O15085 1522 aa31.69■■■□□ 2.66
ZNF549-203ENST00000594943 SYNJ2O15056 1496 aa31.65■■■□□ 2.66
ZNF549-203ENST00000594943 CHMP7Q8WUX9 453 aaPredicted RBP31.64■■■□□ 2.66
ZNF549-203ENST00000594943 CLASP1Q7Z460 1538 aa31.53■■■□□ 2.64
ZNF549-203ENST00000594943 ADAMTS12P58397 1594 aa31.45■■■□□ 2.63
ZNF549-203ENST00000594943 ERICH3Q5RHP9 1530 aa31.41■■■□□ 2.62
ZNF549-203ENST00000594943 GRIN2AQ12879 1464 aa31.4■■■□□ 2.62
ZNF549-203ENST00000594943 ARAP1Q96P48 1450 aa31.4■■■□□ 2.62
ZNF549-203ENST00000594943 CYB5RLQ6IPT4 315 aa31.37■■■□□ 2.61
ZNF549-203ENST00000594943 FHAD1B1AJZ9 1412 aa31.36■■■□□ 2.61
ZNF549-203ENST00000594943 NUP160Q12769 1436 aa31.26■■■□□ 2.6
ZNF549-203ENST00000594943 CEP170Q5SW79 1584 aa31.25■■■□□ 2.59
ZNF549-203ENST00000594943 KIF27Q86VH2 1401 aa31.18■■■□□ 2.58
ZNF549-203ENST00000594943 SHROOM2Q13796 1616 aa31.08■■■□□ 2.57
ZNF549-203ENST00000594943 CUL7Q14999 1698 aa31.06■■■□□ 2.56
ZNF549-203ENST00000594943 IGF1RP08069 1367 aa31.05■■■□□ 2.56
ZNF549-203ENST00000594943 ERCC6L2Q5T890 1561 aa31.04■■■□□ 2.56
ZNF549-203ENST00000594943 RUSC2Q8N2Y8 1516 aa31■■■□□ 2.55
ZNF549-203ENST00000594943 PRG4Q92954 1404 aaPredicted RBP30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms