Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC173Q0VFZ6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC173Q0VFZ6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC173Q0VFZ6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC173Q0VFZ6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC173Q0VFZ6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC173Q0VFZ6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC173Q0VFZ6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC173Q0VFZ6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 DUX4L17-201ENST00000557360 1267 ntBASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 AC004263.2-201ENST00000617183 678 ntBASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 AC069224.1-201ENST00000566372 1715 ntBASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC173Q0VFZ6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 AC097374.2-201ENST00000618617 1306 ntBASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 LINC01101-201ENST00000622953 1884 ntBASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC173Q0VFZ6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 AC020658.6-201ENST00000623564 1870 ntBASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 AC092338.2-201ENST00000568827 1415 ntBASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 KRT18P56-201ENST00000507275 550 ntBASIC18.78■□□□□ 0.6
CCDC173Q0VFZ6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms