RNA–Protein interactions for RNA: ENST00000216027.7

HSCB-201, Transcript of HscB mitochondrial iron-sulfur cluster cochaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSCB, Length 1,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSCB-201ENST00000216027 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
HSCB-201ENST00000216027 CCDC180Q9P1Z9 1646 aa42.06■■■■■ 4.32
HSCB-201ENST00000216027 ABCC9O60706 1549 aa41.43■■■■■ 4.22
HSCB-201ENST00000216027 RB1CC1Q8TDY2 1594 aa39.72■■■■□ 3.95
HSCB-201ENST00000216027 NACADO15069 1562 aa39.59■■■■□ 3.93
HSCB-201ENST00000216027 DCAF8L2P0C7V8 631 aa39.28■■■■□ 3.88
HSCB-201ENST00000216027 MYO15BQ96JP2 1530 aa39.25■■■■□ 3.87
HSCB-201ENST00000216027 ZCCHC6Q5VYS8 1495 aaKnown RBP39.11■■■■□ 3.85
HSCB-201ENST00000216027 UNC13AQ9UPW8 1703 aa38.95■■■■□ 3.83
HSCB-201ENST00000216027 DCAF1Q9Y4B6 1507 aa38.94■■■■□ 3.82
HSCB-201ENST00000216027 PABPN1Q86U42 306 aaKnown RBP eCLIP38.59■■■■□ 3.77
HSCB-201ENST00000216027 BICRAQ9NZM4 1560 aa38.59■■■■□ 3.77
HSCB-201ENST00000216027 DNAJC5BQ9UF47 199 aa38.4■■■■□ 3.74
HSCB-201ENST00000216027 SCRIBQ14160 1630 aa38.27■■■■□ 3.72
HSCB-201ENST00000216027 SHROOM4Q9ULL8 1493 aa38.13■■■■□ 3.69
HSCB-201ENST00000216027 EIF4G1Q04637 1599 aaKnown RBP37.57■■■■□ 3.6
HSCB-201ENST00000216027 CC2D2AQ9P2K1 1620 aa37.52■■■■□ 3.6
HSCB-201ENST00000216027 CECR2Q9BXF3 1484 aa37.28■■■■□ 3.56
HSCB-201ENST00000216027 SMARCA4P51532 1647 aa36.61■■■■□ 3.45
HSCB-201ENST00000216027 NCAPD3P42695 1498 aa36.52■■■■□ 3.44
HSCB-201ENST00000216027 ATAD2BQ9ULI0 1458 aa36.48■■■■□ 3.43
HSCB-201ENST00000216027 BAZ1AQ9NRL2 1556 aaPredicted RBP36.48■■■■□ 3.43
HSCB-201ENST00000216027 SMARCA2P51531 1590 aa36.42■■■■□ 3.42
HSCB-201ENST00000216027 HMGXB3Q12766 1538 aa36.34■■■■□ 3.41
HSCB-201ENST00000216027 PEG3Q9GZU2 1588 aa36.28■■■■□ 3.4
HSCB-201ENST00000216027 MROH2BQ7Z745 1585 aa36.23■■■■□ 3.39
HSCB-201ENST00000216027 BAZ1BQ9UIG0 1483 aaKnown RBP36.13■■■■□ 3.37
HSCB-201ENST00000216027 WIZO95785 1651 aa35.85■■■■□ 3.33
HSCB-201ENST00000216027 NESP48681 1621 aa35.76■■■■□ 3.32
HSCB-201ENST00000216027 ERCC6Q03468 1493 aa35.72■■■■□ 3.31
HSCB-201ENST00000216027 RSF1Q96T23 1441 aaPredicted RBP35.66■■■■□ 3.3
HSCB-201ENST00000216027 LAMC3Q9Y6N6 1575 aa35.64■■■■□ 3.3
HSCB-201ENST00000216027 CUX2O14529 1486 aa35.55■■■■□ 3.28
HSCB-201ENST00000216027 TOP2AP11388 1531 aaKnown RBP35.42■■■■□ 3.26
HSCB-201ENST00000216027 CADPSQ9ULU8 1353 aa35.4■■■■□ 3.26
HSCB-201ENST00000216027 KIF21AQ7Z4S6 1674 aa35.4■■■■□ 3.26
HSCB-201ENST00000216027 THOC2Q8NI27 1593 aaKnown RBP35.38■■■■□ 3.25
HSCB-201ENST00000216027 PDS5BQ9NTI5 1447 aa35.36■■■■□ 3.25
HSCB-201ENST00000216027 CFTRP13569 1480 aa35.14■■■■□ 3.22
HSCB-201ENST00000216027 MRC2Q9UBG0 1479 aa35.04■■■■□ 3.2
HSCB-201ENST00000216027 FANCD2Q9BXW9 1451 aa35.01■■■■□ 3.19
HSCB-201ENST00000216027 CEP164Q9UPV0 1460 aa35■■■■□ 3.19
HSCB-201ENST00000216027 CCDC88BA6NC98 1476 aa34.99■■■■□ 3.19
HSCB-201ENST00000216027 WDR62O43379 1518 aa34.98■■■■□ 3.19
HSCB-201ENST00000216027 PRDM2Q13029 1718 aa34.97■■■■□ 3.19
HSCB-201ENST00000216027 DNAJC5Q9H3Z4 198 aa34.89■■■■□ 3.18
HSCB-201ENST00000216027 URB2Q14146 1524 aaKnown RBP34.71■■■■□ 3.15
HSCB-201ENST00000216027 TOPBP1Q92547 1522 aa34.42■■■■□ 3.1
HSCB-201ENST00000216027 ABCC8Q09428 1581 aa34.38■■■■□ 3.09
HSCB-201ENST00000216027 DNMBPQ6XZF7 1577 aa34.36■■■■□ 3.09
HSCB-201ENST00000216027 SUPT5HO00267 1087 aaKnown RBP34.32■■■■□ 3.08
HSCB-201ENST00000216027 IFT140Q96RY7 1462 aa34.28■■■■□ 3.08
HSCB-201ENST00000216027 ZNF608Q9ULD9 1512 aaPredicted RBP34.18■■■■□ 3.06
HSCB-201ENST00000216027 TARBP1Q13395 1621 aaKnown RBP34.13■■■■□ 3.05
HSCB-201ENST00000216027 POLA1P09884 1462 aaPredicted RBP34.1■■■■□ 3.05
HSCB-201ENST00000216027 EIF4G3O43432 1585 aaKnown RBP34.06■■■■□ 3.04
HSCB-201ENST00000216027 CUX1P39880 1505 aa34.03■■■■□ 3.04
HSCB-201ENST00000216027 FGD5Q6ZNL6 1462 aa33.95■■■■□ 3.02
HSCB-201ENST00000216027 RAD54L2Q9Y4B4 1467 aa33.94■■■■□ 3.02
HSCB-201ENST00000216027 OSCARQ8IYS5 282 aa33.92■■■■□ 3.02
HSCB-201ENST00000216027 AQRO60306 1485 aaKnown RBP eCLIP33.91■■■■□ 3.02
HSCB-201ENST00000216027 SOGA1O94964 1423 aa33.9■■■■□ 3.02
HSCB-201ENST00000216027 WDR97A6NE52 1622 aa33.84■■■■□ 3.01
HSCB-201ENST00000216027 TDRD9Q8NDG6 1382 aaKnown RBP33.75■■■□□ 2.99
HSCB-201ENST00000216027 CHD1O14646 1710 aa33.75■■■□□ 2.99
HSCB-201ENST00000216027 BIVM-ERCC5R4GMW8 1640 aa33.67■■■□□ 2.98
HSCB-201ENST00000216027 TOP2BQ02880 1626 aa33.64■■■□□ 2.98
HSCB-201ENST00000216027 ABCA10Q8WWZ4 1543 aa33.62■■■□□ 2.97
HSCB-201ENST00000216027 WRNQ14191 1432 aaPredicted RBP eCLIP33.61■■■□□ 2.97
HSCB-201ENST00000216027 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
HSCB-201ENST00000216027 SNAPC4Q5SXM2 1469 aa33.6■■■□□ 2.97
HSCB-201ENST00000216027 GRIN2BQ13224 1484 aa33.58■■■□□ 2.97
HSCB-201ENST00000216027 PBRM1Q86U86 1689 aa33.58■■■□□ 2.97
HSCB-201ENST00000216027 ABCA5Q8WWZ7 1642 aa33.57■■■□□ 2.96
HSCB-201ENST00000216027 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
HSCB-201ENST00000216027 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
HSCB-201ENST00000216027 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
HSCB-201ENST00000216027 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
HSCB-201ENST00000216027 GAPVD1Q14C86 1478 aa33.53■■■□□ 2.96
HSCB-201ENST00000216027 FBLN2P98095 1184 aa33.49■■■□□ 2.95
HSCB-201ENST00000216027 TRIM41Q8WV44 630 aa33.49■■■□□ 2.95
HSCB-201ENST00000216027 ARHGEF11O15085 1522 aa33.45■■■□□ 2.95
HSCB-201ENST00000216027 SYNJ2O15056 1496 aa33.43■■■□□ 2.94
HSCB-201ENST00000216027 CHMP7Q8WUX9 453 aaPredicted RBP33.36■■■□□ 2.93
HSCB-201ENST00000216027 CLASP1Q7Z460 1538 aa33.35■■■□□ 2.93
HSCB-201ENST00000216027 ADAMTS12P58397 1594 aa33.26■■■□□ 2.91
HSCB-201ENST00000216027 ERICH3Q5RHP9 1530 aa33.22■■■□□ 2.91
HSCB-201ENST00000216027 GRIN2AQ12879 1464 aa33.17■■■□□ 2.9
HSCB-201ENST00000216027 ARAP1Q96P48 1450 aa33.17■■■□□ 2.9
HSCB-201ENST00000216027 FHAD1B1AJZ9 1412 aa33.12■■■□□ 2.89
HSCB-201ENST00000216027 CYB5RLQ6IPT4 315 aa33.07■■■□□ 2.88
HSCB-201ENST00000216027 CEP170Q5SW79 1584 aa33.05■■■□□ 2.88
HSCB-201ENST00000216027 NUP160Q12769 1436 aa33.05■■■□□ 2.88
HSCB-201ENST00000216027 KIF27Q86VH2 1401 aa32.92■■■□□ 2.86
HSCB-201ENST00000216027 SHROOM2Q13796 1616 aa32.91■■■□□ 2.86
HSCB-201ENST00000216027 IGF1RP08069 1367 aa32.85■■■□□ 2.85
HSCB-201ENST00000216027 CUL7Q14999 1698 aa32.85■■■□□ 2.85
HSCB-201ENST00000216027 ERCC6L2Q5T890 1561 aa32.84■■■□□ 2.85
HSCB-201ENST00000216027 RUSC2Q8N2Y8 1516 aa32.78■■■□□ 2.84
HSCB-201ENST00000216027 PRG4Q92954 1404 aaPredicted RBP32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms