Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 AC091607.1-201ENST00000490318 1060 ntBASIC18.04■□□□□ 0.48
CCDC66A2RUB6 AL121956.5-201ENST00000625261 221 ntBASIC18.04■□□□□ 0.48
CCDC66A2RUB6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 KRT18P35-201ENST00000510488 1269 ntBASIC18.03■□□□□ 0.48
CCDC66A2RUB6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 AC073592.5-201ENST00000624854 528 ntBASIC18.03■□□□□ 0.48
CCDC66A2RUB6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC66A2RUB6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 SNX18-202ENST00000343017 3140 ntBASIC18.02■□□□□ 0.48
CCDC66A2RUB6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 ARMC10P1-201ENST00000313754 855 ntBASIC18.02■□□□□ 0.48
CCDC66A2RUB6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 AC087388.1-201ENST00000571370 1112 ntBASIC18.02■□□□□ 0.48
CCDC66A2RUB6 AP005901.3-202ENST00000581653 237 ntBASIC18.02■□□□□ 0.48
CCDC66A2RUB6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC66A2RUB6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms